RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 A0A1W2PQM1 296 aa5□□□□□ -1.61
SPG11-220ENST00000559933 PMS2P1A4D2B8 440 aa5□□□□□ -1.61
SPG11-220ENST00000559933 OR5K3A6NET4 321 aa5□□□□□ -1.61
SPG11-220ENST00000559933 LILRA5A6NI73 299 aa5□□□□□ -1.61
SPG11-220ENST00000559933 A8MU76 341 aa5□□□□□ -1.61
SPG11-220ENST00000559933 TMEM114B3SHH9 223 aa5□□□□□ -1.61
SPG11-220ENST00000559933 C4orf51C9J302 202 aa5□□□□□ -1.61
SPG11-220ENST00000559933 H3BS24 57 aa5□□□□□ -1.61
SPG11-220ENST00000559933 H7BY64 318 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SAP18O00422 153 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 PIP5K1BO14986 540 aa5□□□□□ -1.61
SPG11-220ENST00000559933 P2RX6O15547 441 aa5□□□□□ -1.61
SPG11-220ENST00000559933 B4GAT1O43505 415 aa5□□□□□ -1.61
SPG11-220ENST00000559933 PRICKLE3O43900 615 aaPredicted RBP5□□□□□ -1.61
SPG11-220ENST00000559933 NPHS1O60500 1241 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SHOX2O60902 331 aaPredicted RBP5□□□□□ -1.61
SPG11-220ENST00000559933 UBXN7O94888 489 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ETHE1O95571 254 aa5□□□□□ -1.61
SPG11-220ENST00000559933 RPN2P04844 631 aa5□□□□□ -1.61
SPG11-220ENST00000559933 RPLP0P05388 317 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 PROS1P07225 676 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CAPN1P07384 714 aa5□□□□□ -1.61
SPG11-220ENST00000559933 LINC00032P0C843 101 aa5□□□□□ -1.61
SPG11-220ENST00000559933 PCNAP12004 261 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SLC2A4P14672 509 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CD1EP15812 388 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ST6GAL1P15907 406 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NPPBP16860 134 aa5□□□□□ -1.61
SPG11-220ENST00000559933 AMD1P17707 334 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NDUFS1P28331 727 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SHMT2P34897 504 aa5□□□□□ -1.61
SPG11-220ENST00000559933 GGT5P36269 586 aa5□□□□□ -1.61
SPG11-220ENST00000559933 BCL6P41182 706 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CAPZBP47756 277 aa5□□□□□ -1.61
SPG11-220ENST00000559933 FASLGP48023 281 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SEPHS1P49903 392 aa5□□□□□ -1.61
SPG11-220ENST00000559933 HNMTP50135 292 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CCNG1P51959 295 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CCL7P80098 99 aa5□□□□□ -1.61
SPG11-220ENST00000559933 REEP5Q00765 189 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NHLH1Q02575 133 aa5□□□□□ -1.61
SPG11-220ENST00000559933 BTKQ06187 659 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CHIT1Q13231 466 aa5□□□□□ -1.61
SPG11-220ENST00000559933 DDX39BQ13838 428 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 KCNAB1Q14722 419 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ABRAXAS2Q15018 415 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CSRP2Q16527 193 aa5□□□□□ -1.61
SPG11-220ENST00000559933 KANK2Q63ZY3 851 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ICE2Q659A1 982 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ATG16L1Q676U5 607 aa5□□□□□ -1.61
SPG11-220ENST00000559933 FCRL6Q6DN72 434 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ZCCHC8Q6NZY4 707 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 SPESP1Q6UW49 350 aa5□□□□□ -1.61
SPG11-220ENST00000559933 GPRIN3Q6ZVF9 776 aa5□□□□□ -1.61
SPG11-220ENST00000559933 USP53Q70EK8 1073 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SPRED1Q7Z699 444 aa5□□□□□ -1.61
SPG11-220ENST00000559933 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
SPG11-220ENST00000559933 RABEPKQ7Z6M1 372 aa5□□□□□ -1.61
SPG11-220ENST00000559933 OOSP2Q86WS3 158 aa5□□□□□ -1.61
SPG11-220ENST00000559933 FAM129CQ86XR2 697 aa5□□□□□ -1.61
SPG11-220ENST00000559933 MARCH9Q86YJ5 346 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NAXDQ8IW45 347 aa5□□□□□ -1.61
SPG11-220ENST00000559933 MRPL41Q8IXM3 137 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5□□□□□ -1.61
SPG11-220ENST00000559933 KLHDC8AQ8IYD2 350 aa5□□□□□ -1.61
SPG11-220ENST00000559933 TCAIMQ8N3R3 496 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ANKRD53Q8N9V6 530 aa5□□□□□ -1.61
SPG11-220ENST00000559933 AVL9Q8NBF6 648 aa5□□□□□ -1.61
SPG11-220ENST00000559933 RCBTB1Q8NDN9 531 aa5□□□□□ -1.61
SPG11-220ENST00000559933 OR2L3Q8NG85 312 aa5□□□□□ -1.61
SPG11-220ENST00000559933 OR2A1Q8NGT9 310 aa5□□□□□ -1.61
SPG11-220ENST00000559933 OR2T11Q8NH01 316 aa5□□□□□ -1.61
SPG11-220ENST00000559933 IFI44Q8TCB0 444 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SLC5A11Q8WWX8 675 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ATL1Q8WXF7 558 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NCSTNQ92542 709 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ATP6V1E2Q96A05 226 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CHMP6Q96FZ7 201 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CNDP1Q96KN2 507 aa5□□□□□ -1.61
SPG11-220ENST00000559933 C3orf30Q96M34 536 aa5□□□□□ -1.61
SPG11-220ENST00000559933 PRAP1Q96NZ9 151 aa5□□□□□ -1.61
SPG11-220ENST00000559933 MAP3K3Q99759 626 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CCDC3Q9BQI4 270 aa5□□□□□ -1.61
SPG11-220ENST00000559933 PLCD4Q9BRC7 762 aa5□□□□□ -1.61
SPG11-220ENST00000559933 C1QTNF3Q9BXJ4 246 aa5□□□□□ -1.61
SPG11-220ENST00000559933 NUF2Q9BZD4 464 aa5□□□□□ -1.61
SPG11-220ENST00000559933 AICDAQ9GZX7 198 aa5□□□□□ -1.61
SPG11-220ENST00000559933 SLC32A1Q9H598 525 aa5□□□□□ -1.61
SPG11-220ENST00000559933 CCDC134Q9H6E4 229 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ACTR8Q9H981 624 aa5□□□□□ -1.61
SPG11-220ENST00000559933 MRPS30Q9NP92 439 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 HRASLS2Q9NWW9 162 aa5□□□□□ -1.61
SPG11-220ENST00000559933 GEMIN8Q9NWZ8 242 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 VTI1BQ9UEU0 232 aa5□□□□□ -1.61
SPG11-220ENST00000559933 POLG2Q9UHN1 485 aa5□□□□□ -1.61
SPG11-220ENST00000559933 G3BP2Q9UN86 482 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 CSNK1G3Q9Y6M4 447 aa5□□□□□ -1.61
SPG11-220ENST00000559933 ZFHX4Q86UP3 3567 aa5□□□□□ -1.61
SPG11-220ENST00000559933 IGHV5-51A0A0C4DH38 117 aa4.99□□□□□ -1.61
SPG11-220ENST00000559933 A0A0G2JN53 185 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms