RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ARL15Q9NXU5 204 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
VPS18-203ENST00000558855 TRAV17A0A0B4J275 112 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 DYTNA2CJ06 578 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 A8MUI8 341 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 NDUFS4O43181 175 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 OR1F1O43749 312 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 GALR3O60755 368 aaPredicted RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 TTC4O95801 387 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 ZNF888P0CJ79 500 aaPredicted RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 ZNF37AP17032 561 aaPredicted RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 HRH2P25021 359 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 GRNP28799 593 aaKnown RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 TAS2R39P59534 338 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 IL2P60568 153 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 BTG2P78543 158 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 REEP5Q00765 189 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 NOTCH2Q04721 2471 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 ZRSR2Q15696 482 aaKnown RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 DEFB134Q4QY38 66 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 ZNF468Q5VIY5 522 aaPredicted RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 DUPD1Q68J44 220 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 PLAG1Q6DJT9 500 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 LRRC8EQ6NSJ5 796 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 PAPD4Q6PIY7 484 aaKnown RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 KIAA0408Q6ZU52 694 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 GALNT7Q86SF2 657 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 CEP97Q8IW35 865 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 MDS2Q8NDY4 140 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 THAP11Q96EK4 314 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 SARGQ9BW04 601 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 TRIM31Q9BZY9 425 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS18-203ENST00000558855 GRPEL1Q9HAV7 217 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 ANKHQ9HCJ1 492 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 PPANQ9NQ55 473 aaKnown RBP12.75□□□□□ -0.37
VPS18-203ENST00000558855 PYCARDQ9ULZ3 195 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 SLC22A7Q9Y694 548 aa12.75□□□□□ -0.37
VPS18-203ENST00000558855 APCP25054 2843 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 TRBC2A0A5B9 178 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 FAM227AF5H4B4 570 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 CHST10O43529 356 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 PRAMEF4O60810 478 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 PRAMEF2O60811 474 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 SEC31AO94979 1220 aaKnown RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 WISP3O95389 354 aaPredicted RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 SAT1P21673 171 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 HNF4AP41235 474 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 RPL21P46778 160 aaKnown RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 SCTRP47872 440 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 CCR8P51685 355 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 TUBA3CQ13748 450 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 MORF4L2Q15014 288 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 FBXO48Q5FWF7 155 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 ACER2Q5QJU3 275 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 PRAMEF9Q5VWM5 478 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 ADNP2Q6IQ32 1131 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 FAM45BPQ6NSW5 357 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 TUBA3EQ6PEY2 450 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 NCCRP1Q6ZVX7 275 aaPredicted RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 ZNF227Q86WZ6 799 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 FAM45AQ8TCE6 357 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 UTP15Q8TED0 518 aaKnown RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 PCBD2Q9H0N5 130 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 TSPAN10Q9H1Z9 355 aaPredicted RBP12.74□□□□□ -0.37
VPS18-203ENST00000558855 STMN3Q9NZ72 180 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 VWA7Q9Y334 891 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 DCHS2Q6V1P9 2916 aa12.74□□□□□ -0.37
VPS18-203ENST00000558855 PDZD2O15018 2839 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 FAM95CA0A1B0GW59 222 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CXorf49A8MYA2 514 aaPredicted RBP12.73□□□□□ -0.37
VPS18-203ENST00000558855 UNC5CO95185 931 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 TBX6O95947 436 aaPredicted RBP12.73□□□□□ -0.37
VPS18-203ENST00000558855 SERPIND1P05546 499 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 UQCRHP07919 91 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SLC35G6P0C7Q6 338 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SMIM10L1P0DMW3 83 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 MAOAP21397 527 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CD96P40200 585 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 GDF5P43026 501 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 SLC26A5P58743 744 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 RAB8AP61006 207 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 DR1Q01658 176 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 USP10Q14694 798 aaKnown RBP12.73□□□□□ -0.37
VPS18-203ENST00000558855 CDSNQ15517 529 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 PCGF5Q86SE9 256 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 TMPRSS11BQ86T26 416 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 THOC6Q86W42 341 aaKnown RBP12.73□□□□□ -0.37
VPS18-203ENST00000558855 SPATA6LQ8N4H0 392 aa12.73□□□□□ -0.37
VPS18-203ENST00000558855 TMEM52Q8NDY8 209 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms