RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 PPP1R36Q96LQ0 422 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 TRMOQ9BU70 441 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 SARGQ9BW04 601 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 CHRNA10Q9GZZ6 450 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 NT5DC2Q9H857 520 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
CCDC33-204ENST00000558645 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 RARRES3Q9UL19 164 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 RUVBL1Q9Y265 456 aaKnown RBP11.25□□□□□ -0.61
CCDC33-204ENST00000558645 STK38LQ9Y2H1 464 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 TRAF6Q9Y4K3 522 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 B3GALT1Q9Y5Z6 326 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 AP1M2Q9Y6Q5 423 aa11.25□□□□□ -0.61
CCDC33-204ENST00000558645 TEX51A0A1B0GUA7 166 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 TCP11X1B4DZS4 312 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 POLR1CO15160 346 aaPredicted RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 ZNF28P17035 718 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 AHRP35869 848 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 ITGA1P56199 1179 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 GALNT1Q10472 559 aaPredicted RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 IFT88Q13099 833 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 PDCD2Q16342 344 aaPredicted RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 UGT3A2Q3SY77 523 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 PRSS41Q7RTY9 318 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 TMEM126BQ8IUX1 230 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 TBC1D19Q8N5T2 526 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 RAB3IL1Q8TBN0 382 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 SELENOMQ8WWX9 145 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 THOC1Q96FV9 657 aaKnown RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 F2RL3Q96RI0 385 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 SORBS1Q9BX66 1292 aaKnown RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 SLC29A3Q9BZD2 475 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 RHBGQ9H310 441 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 OR51B5Q9H339 312 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 TUBB1Q9H4B7 451 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 ELOVL6Q9H5J4 265 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 FANCEQ9HB96 536 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 DMRT3Q9NQL9 472 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 THAP1Q9NVV9 213 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 FOXJ2Q9P0K8 574 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 AKAP7Q9P0M2 348 aaPredicted RBP11.24□□□□□ -0.61
CCDC33-204ENST00000558645 SNX6Q9UNH7 406 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 PCDHGA11Q9Y5H2 935 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 IGF2RP11717 2491 aa11.24□□□□□ -0.61
CCDC33-204ENST00000558645 CHD6Q8TD26 2715 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 CELSR3Q9NYQ7 3312 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 B4E171 279 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 C9orf172C9J069 976 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 RTCAO00442 366 aaKnown RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 KLF11O14901 512 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ZSCAN9O15535 394 aaPredicted RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ZNF749O43361 778 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 TNFSF15O95150 251 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 NTRK1P04629 796 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 LINC00032P0C843 101 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 C1QTNF9P0C862 333 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ZNF888P0CJ79 500 aaPredicted RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 UROSP10746 265 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 FGF5P12034 268 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 TSPAN7P41732 249 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 RPL14P50914 215 aaKnown RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 HMGCS1Q01581 520 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 RELAQ04206 551 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 PRTGQ2VWP7 1150 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 PPP1R3BQ86XI6 285 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 GPR135Q8IZ08 494 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 CACTIN-AS1Q8N1I8 211 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 SLC38A9Q8NBW4 561 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 NT5CQ8TCD5 201 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 TWIST2Q8WVJ9 160 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 UBE2E3Q969T4 207 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 REPS1Q96D71 796 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 C10orf90Q96M02 699 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ZNF285Q96NJ3 590 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 MS4A8Q9BY19 250 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ACPTQ9BZG2 426 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 ILKAPQ9H0C8 392 aaPredicted RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 FBXO8Q9NRD0 319 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 DHCR7Q9UBM7 475 aaKnown RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 GIMAP2Q9UG22 337 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 NDOR1Q9UHB4 597 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 SERTAD3Q9UJW9 196 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
CCDC33-204ENST00000558645 NUP214P35658 2090 aaPredicted RBP11.23□□□□□ -0.61
CCDC33-204ENST00000558645 HYKKA2RU49 373 aa11.22□□□□□ -0.61
CCDC33-204ENST00000558645 LRIT2A6NDA9 550 aa11.22□□□□□ -0.61
CCDC33-204ENST00000558645 ZNF860A6NHJ4 632 aa11.22□□□□□ -0.61
CCDC33-204ENST00000558645 PIP5K1BO14986 540 aa11.22□□□□□ -0.61
CCDC33-204ENST00000558645 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
CCDC33-204ENST00000558645 SRPX2O60687 465 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms