RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EFR3BQ9Y2G0 817 aa4.86□□□□□ -1.63
SPG11-208ENST00000558155 CELSR1Q9NYQ6 3014 aa4.86□□□□□ -1.63
SPG11-208ENST00000558155 ZNF407Q9C0G0 2248 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 A0A0U1RQJ8 604 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 OR14I1A6ND48 311 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 FIGNL2A6NMB9 653 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 A6NNC1 897 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 MAGEB17A8MXT2 336 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 SGK494L7N484 410 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 BCKDKO14874 412 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 KIF5CO60282 957 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 LY6G6DO95868 133 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 GLI4P10075 376 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 HRH2P25021 359 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ADRA1DP25100 572 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 HOXC12P31275 282 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 RFC3P40938 356 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 TTPAP49638 278 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PNLIPRP1P54315 467 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PPIAP62937 165 aaKnown RBP4.85□□□□□ -1.63
SPG11-208ENST00000558155 PRAMEP78395 509 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 NKX6-1P78426 367 aaPredicted RBP4.85□□□□□ -1.63
SPG11-208ENST00000558155 PPP2R2BQ00005 443 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PLGLB1Q02325 96 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ABRAXAS2Q15018 415 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 DAZAP2Q15038 168 aaPredicted RBP4.85□□□□□ -1.63
SPG11-208ENST00000558155 P3H1Q32P28 736 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 CCSMST1Q4G0I0 132 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 EMC4Q5J8M3 183 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 TSTD2Q5T7W7 516 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ICE2Q659A1 982 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ZNF425Q6IV72 752 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 SUSD1Q6UWL2 747 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PAMR1Q6UXH9 720 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 B3GNT6Q6ZMB0 384 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 MICALCLQ6ZW33 695 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 WDR53Q7Z5U6 358 aaPredicted RBP4.85□□□□□ -1.63
SPG11-208ENST00000558155 ADCK2Q7Z695 626 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ZNF227Q86WZ6 799 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 LRRC6Q86X45 466 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PRIMA1Q86XR5 153 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 KLHDC8BQ8IXV7 354 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 RPRMLQ8N4K4 120 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 ZFP62Q8NB50 900 aaPredicted RBP4.85□□□□□ -1.63
SPG11-208ENST00000558155 CAMKVQ8NCB2 501 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 OR8K1Q8NGG5 319 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 OR5M9Q8NGP3 310 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 CCDC42Q96M95 316 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 OR1F2PQ96R84 312 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 PANX2Q96RD6 677 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 TIMMDC1Q9NPL8 285 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 FAM114A2Q9NRY5 505 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 TMEM184CQ9NVA4 438 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 CRIM1Q9NZV1 1036 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 HCN3Q9P1Z3 774 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 B4GALT7Q9UBV7 327 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 INTUQ9ULD6 942 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 NFS1Q9Y697 457 aa4.85□□□□□ -1.63
SPG11-208ENST00000558155 CSPG4Q6UVK1 2322 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 KCNE1BA0A087WTH5 132 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 IGKV1-8A0A0C4DH67 115 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 A0A0G2JNJ9 132 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 FEZF1A0PJY2 475 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ERI2A8K979 691 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 HSPB2A8KAH6 182 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 H7BY64 318 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ACOT7O00154 380 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CES2O00748 559 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PFDN6O15212 129 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CD3EAPO15446 510 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 P2RX6O15547 441 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 WDR1O75083 606 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 NDUFS3O75489 264 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 TJP3O95049 919 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ATE1O95260 518 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 MATN4O95460 622 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 METTL18O95568 372 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CATP04040 527 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 TUBB4AP04350 444 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 GYPCP04921 128 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ERGP11308 486 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 IL1RNP18510 177 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 RPS3P23396 243 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPG11-208ENST00000558155 JAK1P23458 1154 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PCSK6P29122 969 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 UQCRC1P31930 480 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CLCN2P51788 898 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 RPS15AP62244 130 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 SKP1P63208 163 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 RHAGQ02094 409 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CDH17Q12864 832 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 SNTB1Q13884 538 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 HSPB2Q16082 182 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 FLYWCH1Q4VC44 716 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 NDUFAF5Q5TEU4 345 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 TMEM214Q6NUQ4 689 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms