RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RBBP7Q16576 425 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 PRMT9Q6P2P2 845 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 LAS2Q8IYD9 372 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 L3MBTL4Q8NA19 623 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 ZCCHC10Q8TBK6 192 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 TRPC4APQ8TEL6 797 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 CCT6BQ92526 530 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 MVB12AQ96EY5 273 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 CDK15Q96Q40 435 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 RHBGQ9H310 441 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 TMBIM4Q9HC24 238 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 IFT80Q9P2H3 777 aaPredicted RBP24.3■■□□□ 1.48
SMAD6-202ENST00000557916 CDC14AQ9UNH5 594 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 RNF11Q9Y3C5 154 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 SEC16AO15027 2179 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 C9J4A7 227 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 TERTO14746 1132 aaKnown RBP24.29■■□□□ 1.48
SMAD6-202ENST00000557916 CAPN1P07384 714 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 SERPINA6P08185 405 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 F8A1P23610 371 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 OR1D4P47884 311 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 DNAJB13P59910 316 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 TRAF3Q13114 568 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 SLC9A5Q14940 896 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 FAM198BQ6UWH4 519 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 CCNYL1Q8N7R7 359 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 OR7G3Q8NG95 312 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.29■■□□□ 1.48
SMAD6-202ENST00000557916 C17orf62Q9BQA9 187 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 ZNF304Q9HCX3 659 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 IL17BQ9UHF5 180 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 KCND3Q9UK17 655 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 MAU2Q9Y6X3 613 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 ZFHX4Q86UP3 3567 aa24.29■■□□□ 1.48
SMAD6-202ENST00000557916 A0A0A6YYC8 382 aaPredicted RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 I3L1I5 382 aaPredicted RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 PPP6CO00743 305 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 FOXS1O43638 330 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 CLEC3AO75596 197 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 OTCP00480 354 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 PIM1P11309 404 aaPredicted RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 PCNAP12004 261 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 RPS15P62841 145 aaKnown RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 SNRPNP63162 240 aaKnown RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 HYAL2Q12891 473 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 MLIPQ5VWP3 458 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 ADNP2Q6IQ32 1131 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 VN1R5Q7Z5H4 357 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 MILR1Q7Z6M3 343 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 COL26A1Q96A83 441 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 GPR87Q9BY21 358 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 SLC6A16Q9GZN6 736 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 PRM3Q9NNZ6 103 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 SLC22A11Q9NSA0 550 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 GPN3Q9UHW5 284 aaPredicted RBP24.28■■□□□ 1.48
SMAD6-202ENST00000557916 PCDHGA11Q9Y5H2 935 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 SLC22A7Q9Y694 548 aa24.28■■□□□ 1.48
SMAD6-202ENST00000557916 AGPSO00116 658 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 EFSO43281 561 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ONECUT2O95948 504 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 RAB40ALP0C0E4 278 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 NAGLUP54802 743 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 UCNP55089 124 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 PCLAFQ15004 111 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 CPSF6Q16630 551 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ARHGAP40Q5TG30 622 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 CCDC81Q6ZN84 652 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 C10orf107Q8IVU9 208 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 OR4F6Q8NGB9 312 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 MMABQ96EY8 250 aaPredicted RBP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ANKHQ9HCJ1 492 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 FARSAQ9Y285 508 aaKnown RBP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 PCDHGA6Q9Y5G7 932 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 LAMA5O15230 3695 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 URADA6NGE7 173 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 H0YIV9 168 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ZZEF1O43149 2961 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 IL1RNP18510 177 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 AVPR1BP47901 424 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 STXBP1P61764 594 aaKnown RBP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 NCF4Q15080 339 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 TOR1AIP1Q5JTV8 583 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 CFAP157Q5JU67 520 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 LIPMQ5VYY2 423 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ABHD13Q7L211 337 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 ENDOVQ8N8Q3 282 aaKnown RBP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 OR9A4Q8NGU2 314 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 REPS1Q96D71 796 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 FAM117AQ9C073 453 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 GSTO2Q9H4Y5 243 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 KLHL31Q9H511 634 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 VIPAS39Q9H9C1 493 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 KCNK9Q9NPC2 374 aa24.27■■□□□ 1.48
SMAD6-202ENST00000557916 MRPS18BQ9Y676 258 aaKnown RBP24.27■■□□□ 1.48
SMAD6-202ENST00000557916 A0A1B0GTL3 188 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 PRPF4O43172 522 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 NSA2O95478 260 aaKnown RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 MLYCDO95822 493 aa24.26■■□□□ 1.47
SMAD6-202ENST00000557916 ZNF888P0CJ79 500 aaPredicted RBP24.26■■□□□ 1.47
SMAD6-202ENST00000557916 WT1P19544 449 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms