RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 OR2W5A6NFC9 320 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 ZG16O60844 167 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 JAK1P23458 1154 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 IVDP26440 423 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 PGGT1BP53609 377 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 PWP1Q13610 501 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
SHMT2-235ENST00000557740 DEFB134Q4QY38 66 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 STEAP4Q687X5 459 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 NIPAL1Q6NVV3 410 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 PAPD4Q6PIY7 484 aaKnown RBP13.79□□□□□ -0.2
SHMT2-235ENST00000557740 ABHD13Q7L211 337 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 SHISA5Q8N114 240 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 BEST3Q8N1M1 668 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 AMER2Q8N7J2 671 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 DNAJB8Q8NHS0 232 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 M1APQ8TC57 530 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 SLC5A11Q8WWX8 675 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 PWWP2AQ96N64 755 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 LPAR4Q99677 370 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 OLFM1Q99784 485 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 SARGQ9BW04 601 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 DYRK1BQ9Y463 629 aa13.79□□□□□ -0.2
SHMT2-235ENST00000557740 MAGEB17A8MXT2 336 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 GALR3O60755 368 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-235ENST00000557740 UNC5CO95185 931 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 FHP07954 510 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF888P0CJ79 500 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-235ENST00000557740 ZNF37AP17032 561 aaPredicted RBP13.78□□□□□ -0.2
SHMT2-235ENST00000557740 ALOX12P18054 663 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 SAT1P21673 171 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 ITGA8P53708 1063 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 OR4D2P58180 307 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TAS2R50P59544 299 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 RHAGQ02094 409 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 CATSPEREQ5SY80 951 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TMEM207Q6UWW9 146 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 STRA8Q7Z7C7 330 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 AFAP1L2Q8N4X5 818 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 SLC5A8Q8N695 610 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 OR5T3Q8NGG3 340 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TSLPQ969D9 159 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 NEIL2Q969S2 332 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TBC1D20Q96BZ9 403 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 MOCOSQ96EN8 888 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 OR4K3Q96R72 315 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 WDR83Q9BRX9 315 aaKnown RBP13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 PELI2Q9HAT8 420 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 MMP25Q9NPA2 562 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 LANCL2Q9NS86 450 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 SUCOQ9UBS9 1254 aaKnown RBP13.78□□□□□ -0.2
SHMT2-235ENST00000557740 SEC14L3Q9UDX4 400 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 ZFP69BQ9UJL9 534 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TEX264Q9Y6I9 313 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
SHMT2-235ENST00000557740 TRGV8A0A0C4DH27 118 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 NPEPPSL1A6NEC2 478 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 URADA6NGE7 173 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 TTI1O43156 1089 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 CHST10O43529 356 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 AHRP35869 848 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 SCTRP47872 440 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 OLR1P78380 273 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 REEP5Q00765 189 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 PMP22Q01453 160 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 RBPJQ06330 500 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 MGAT5Q09328 741 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 TUBA3CQ13748 450 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 FRG1Q14331 258 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 USP10Q14694 798 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 MEP1AQ16819 746 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 ZXDCQ2QGD7 858 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 TUBA3EQ6PEY2 450 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 SBSNQ6UWP8 590 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 TMPRSS11BQ86T26 416 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 THOC6Q86W42 341 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 NKAPQ8N5F7 415 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 PLPP5Q8NEB5 264 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 NT5CQ8TCD5 201 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 PDLIM5Q96HC4 596 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 EGFL8Q99944 293 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 AIF1LQ9BQI0 150 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 UTP23Q9BRU9 249 aaKnown RBP13.77□□□□□ -0.21
SHMT2-235ENST00000557740 TRIM31Q9BZY9 425 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 SPNS1Q9H2V7 528 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.21
SHMT2-235ENST00000557740 PSAT1Q9Y617 370 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms