RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 REG4Q9BYZ8 158 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 ISCUQ9H1K1 167 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 C6orf203Q9P0P8 240 aaPredicted RBP8.72□□□□□ -1.01
PABPN1-208ENST00000557702 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.72□□□□□ -1.01
PABPN1-208ENST00000557702 ROS1P08922 2347 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
PABPN1-208ENST00000557702 HEATR5BQ9P2D3 2071 aa8.71□□□□□ -1.01
PABPN1-208ENST00000557702 LRRD1A4D1F6 860 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 AHRRA9YTQ3 701 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 H7C0S8 307 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 SGK494L7N484 410 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 CELA3AP09093 270 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 EZRP15311 586 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 CNR1P21554 472 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 IL10P22301 178 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 CCR7P32248 378 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 OPRM1P35372 400 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 AGFG1P52594 562 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 ATP5J2P56134 94 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 MEF2AQ02078 507 aaPredicted RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 VEZF1Q14119 521 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 CAVIN1Q6NZI2 390 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 RANBP10Q6VN20 620 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 PACS1Q6VY07 963 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 BZW1Q7L1Q6 419 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 PRSS41Q7RTY9 318 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 LACC1Q8IV20 430 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 GPALPP1Q8IXQ4 340 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 TFB1MQ8WVM0 346 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 ASZ1Q8WWH4 475 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 SYN2Q92777 582 aaPredicted RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 ZBED6CLQ96FA7 236 aaPredicted RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 DNAJC1Q96KC8 554 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 VAT1Q99536 393 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 APOL2Q9BQE5 337 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 ANP32EQ9BTT0 268 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 RBM24Q9BX46 236 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 BEX2Q9BXY8 128 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 RBSNQ9H1K0 784 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 CXorf56Q9H5V9 222 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 TRMT1Q9NXH9 659 aaKnown RBP8.71□□□□□ -1.02
PABPN1-208ENST00000557702 JKAMPQ9P055 326 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 SPRR3Q9UBC9 169 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 PCYOX1Q9UHG3 505 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 FBXW2Q9UKT8 454 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 MYO6Q9UM54 1294 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 NFS1Q9Y697 457 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 MGAM2Q2M2H8 2515 aa8.71□□□□□ -1.02
PABPN1-208ENST00000557702 MEGF8Q7Z7M0 2845 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SCN3AQ9NY46 2000 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 IGKV1-8A0A0C4DH67 115 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 A0A0G2JMM0 328 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 TRBV11-1A0A0K0K1C0 115 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 A0A1W2PPB8 328 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 A0A1W2PRS3 328 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SAGE2PA6NJ88 616 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 KIR3DP1A8MWS1 328 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ZNF487B1APH4 448 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 G3V3Y1 287 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ANXA9O76027 345 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 C1orf105O95561 183 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 APOA4P06727 396 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 IL1RNP18510 177 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ENDOUP21128 410 aaKnown RBP8.7□□□□□ -1.02
PABPN1-208ENST00000557702 CTSSP25774 331 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 CYLC1P35663 651 aaPredicted RBP8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SOX18P35713 384 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 CLCN2P51788 898 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 GEMP55040 296 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 WNT3P56703 355 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 TAS2R40P59535 323 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SNRPNP63162 240 aaKnown RBP8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
PABPN1-208ENST00000557702 RELAQ04206 551 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 UBXN1Q04323 297 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 MSLNQ13421 630 aaPredicted RBP8.7□□□□□ -1.02
PABPN1-208ENST00000557702 CLEC12BQ2HXU8 276 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 MICALCLQ6ZW33 695 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 PLEKHM3Q6ZWE6 761 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ABHD13Q7L211 337 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 CPNE8Q86YQ8 564 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 RFX6Q8HWS3 928 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.7□□□□□ -1.025e-6■■■□□ 17.5
PABPN1-208ENST00000557702 ZNF567Q8N184 647 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 GSDMBQ8TAX9 411 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 TMEM171Q8WVE6 324 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ASB15Q8WXK1 588 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 HSPBAP1Q96EW2 488 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 PEX11GQ96HA9 241 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 OR1F2PQ96R84 312 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 SGPP1Q9BX95 441 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 TSSK1BQ9BXA7 367 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 RBCK1Q9BYM8 510 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 LANCL2Q9NS86 450 aa8.7□□□□□ -1.02
PABPN1-208ENST00000557702 ZNF701Q9NV72 531 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms