RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MED22Q15528 200 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 TAF1CQ15572 869 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 TSTQ16762 297 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 EXOC3L2Q2M3D2 409 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 IFI44LQ53G44 452 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 CPTPQ5TA50 214 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ANXA8L1Q5VT79 327 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 TMC5Q6UXY8 1006 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ANKS3Q6ZW76 656 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 OR4C15Q8NGM1 316 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 OR52J3Q8NH60 311 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ASB11Q8WXH4 323 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 LINC01599Q8WXQ3 324 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ELMO1Q92556 727 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 MGLLQ99685 303 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 NIPSNAP1Q9BPW8 284 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 KCNS3Q9BQ31 491 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 CDCA4Q9BXL8 241 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ROGDIQ9GZN7 287 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 DYRK4Q9NR20 520 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 C14orf119Q9NWQ9 140 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 ERVK13-1Q9NX77 482 aa11.39□□□□□ -0.59
VIPAS39-211ENST00000557658 C1orf226A1L170 272 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 AGAP14A8MT82 685 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 A8MVJ9 347 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 A8MX80 341 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CENPBD1B2RD01 187 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 K7ERQ8 282 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CTDSP2O14595 271 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CAPN5O15484 640 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 SLITRK5O94991 958 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 OR56A5P0C7T3 313 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CYBAP13498 195 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CSKP41240 450 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 PTPN5P54829 565 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CDC42P60953 191 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 IRF8Q02556 426 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 BCL7AQ4VC05 210 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 RTP2Q5QGT7 225 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 LIPJQ5W064 366 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 C19orf48Q6RUI8 117 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 KRT73Q86Y46 540 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 WBP2Q969T9 261 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 TSEN34Q9BSV6 310 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 C3orf14Q9HBI5 128 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CNOT2Q9NZN8 540 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 SH3D21A4FU49 640 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 SOCS5O75159 536 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 MPC1LP0DKB6 136 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 HLA-EP13747 358 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 ITGA2P17301 1181 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 MAPK8P45983 427 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 ASMTP46597 345 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 MRPS15P82914 257 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 SP140Q13342 867 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 DDX39BQ13838 428 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 ZFP69Q49AA0 526 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 FUT10Q6P4F1 479 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 NAGSQ8N159 534 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 DCAF4L2Q8NA75 395 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 GPR26Q8NDV2 337 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 OR5M11Q96RB7 305 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 TRPM5Q9NZQ8 1165 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 ZNF282Q9UDV7 671 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 MAPRE3Q9UPY8 281 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 OR51B4Q9Y5P0 310 aa11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 CFAP20Q9Y6A4 193 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-211ENST00000557658 TBKBP1A7MCY6 615 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 H3BQ06 376 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 SLC16A5O15375 505 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 MPZL2O60487 215 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 UGDHO60701 494 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GCM2O75603 506 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 UGT2B17O75795 530 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 OPN1SWP03999 348 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TNFRSF1BP20333 461 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TNFSF8P32971 234 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 AP1S2P56377 157 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GAB1Q13480 694 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 KCNA10Q16322 511 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 CLPPQ16740 277 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 RETSATQ6NUM9 610 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ZNF517Q6ZMY9 492 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TSPAN33Q86UF1 283 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ATCAYQ86WG3 371 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 RNF130Q86XS8 419 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ASCC1Q8N9N2 400 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TRNT1Q96Q11 434 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 OR2A14Q96R47 310 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ATG10Q9H0Y0 220 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 SPATA6Q9NWH7 488 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 MARCH5Q9NX47 278 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TAS2R16Q9NYV7 291 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TBC1D24Q9ULP9 559 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms