RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 THAP10Q9P2Z0 257 aaPredicted RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 PCTPQ9UKL6 214 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 PRPF19Q9UMS4 504 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 G3BP2Q9UN86 482 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 OARD1Q9Y530 152 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 DNAJC15Q9Y5T4 150 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 COPG1Q9Y678 874 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.33□□□□□ -1.72
SRP54-212ENST00000556992 DMDP11532 3685 aa4.33□□□□□ -1.72
SRP54-212ENST00000556992 WDFY4Q6ZS81 3184 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCDC163A0A0D9SF12 145 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 GAGE12BA1L429 117 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 DYTNA2CJ06 578 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 GAGE12HA6NDE8 117 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NCF1BA6NI72 391 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 NCF1CA8MVU1 366 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 GFYI3L273 518 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SLC28A1O00337 649 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 IFRD1O00458 451 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 E2F3O00716 465 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PPP6CO00743 305 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 AIM2O14862 343 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PIP5K1BO14986 540 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 AREL1O15033 823 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TSPAN6O43657 245 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SYNCRIPO60506 623 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCNT2O60583 730 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 PRAMEF4O60810 478 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ATG13O75143 517 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 FKBP6O75344 327 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ENTPD5O75356 428 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ULK1O75385 1050 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 STK16O75716 305 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SEC24DO94855 1032 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 SLCO2B1O94956 709 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 KAT7O95251 611 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NPPAP01160 153 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 APODP05090 189 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CTSLP07711 333 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ELFN1P0C7U0 828 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 LINC00032P0C843 101 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 EBLN1P0CF75 366 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 EGR2P11161 476 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 HGFP14210 728 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 NCF1P14598 390 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 ITGB6P18564 788 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TSPAN8P19075 237 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CYP2A7P20853 494 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 FCARP24071 287 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCR7P32248 378 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 MMP12P39900 470 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 MTHFRP42898 656 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CPA2P48052 419 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 MRPL19P49406 292 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCNG1P51959 295 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HK3P52790 923 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 AP1S2P56377 157 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ACTR3P61158 418 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 B4GALNT1Q00973 533 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SEMG2Q02383 582 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CREB5Q02930 508 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SLC34A1Q06495 639 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HSPA14Q0VDF9 509 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HYAL1Q12794 435 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TMEM115Q12893 351 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 SP140Q13342 867 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 GTF2H2Q13888 395 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 FASTKQ14296 549 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 ZNF234Q14588 700 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CCDC6Q16204 474 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PPP1R3AQ16821 1122 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SMU1Q2TAY7 513 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TMEM52BQ4KMG9 183 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 KHDC1Q4VXA5 237 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 AGKQ53H12 422 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 COQ5Q5HYK3 327 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HENMT1Q5T8I9 393 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 C1orf146Q5VVC0 180 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 METRNLQ641Q3 311 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 CLEC6AQ6EIG7 209 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 GTF2H2CQ6P1K8 395 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 AAGABQ6PD74 315 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SBSNQ6UWP8 590 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 VITQ6UXI7 678 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 HACD2Q6Y1H2 254 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 UBE2R2Q712K3 238 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 MTSS1LQ765P7 747 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 GET4Q7L5D6 327 aaPredicted RBP4.32□□□□□ -1.72
SRP54-212ENST00000556992 SYVN1Q86TM6 617 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 SNX32Q86XE0 403 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 DEFB107AQ8IZN7 70 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 FAM9CQ8IZT9 166 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 DSELQ8IZU8 1212 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 TERB1Q8NA31 727 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 PDPRQ8NCN5 879 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 AGAP11Q8TF27 550 aa4.32□□□□□ -1.72
SRP54-212ENST00000556992 UBTD2Q8WUN7 234 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms