RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 HERC3Q15034 1050 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 RBBP5Q15291 538 aaKnown RBP21.68■■□□□ 1.06
TDP1-216ENST00000556867 TSNAXIP1Q2TAA8 658 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 VWA2Q5GFL6 755 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 AFAP1L2Q8N4X5 818 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 MTBPQ96DY7 904 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 CRB3Q9BUF7 120 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 NT5DC2Q9H857 520 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 ANKHQ9HCJ1 492 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 P4HTMQ9NXG6 502 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 HS3ST3B1Q9Y662 390 aa21.68■■□□□ 1.06
TDP1-216ENST00000556867 FFAR3O14843 346 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 GPR42O15529 346 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 PRAMEF4O60810 478 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 GSTM2P28161 218 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 MAT1AQ00266 395 aaKnown RBP21.67■■□□□ 1.06
TDP1-216ENST00000556867 C19orf57Q0VDD7 668 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 SETDB1Q15047 1291 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 PRAMEF9Q5VWM5 478 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 TMIGD1Q6UXZ0 262 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 TIFABQ6ZNK6 161 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 PDSS2Q86YH6 399 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 ZC3H7AQ8IWR0 971 aaKnown RBP21.67■■□□□ 1.06
TDP1-216ENST00000556867 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.67■■□□□ 1.06
TDP1-216ENST00000556867 CNPY4Q8N129 248 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 KRT78Q8N1N4 520 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 TTLQ8NG68 377 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 CREB3L4Q8TEY5 395 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 PTCD3Q96EY7 689 aaKnown RBP21.67■■□□□ 1.06
TDP1-216ENST00000556867 SEC16BQ96JE7 1060 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 FER1L6-AS2Q96M78 137 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 SLC6A16Q9GZN6 736 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 OPTCQ9UBM4 332 aa21.67■■□□□ 1.06
TDP1-216ENST00000556867 K7EPI3 171 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 AGPSO00116 658 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 SOCS6O14544 535 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 CEACAM4O75871 244 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 KLHL18O94889 574 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 SERPIND1P05546 499 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 SERPINA6P08185 405 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 RBP1P09455 135 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 GFAPP14136 432 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 ALDH18A1P54886 795 aaKnown RBP21.66■■□□□ 1.06
TDP1-216ENST00000556867 NFATC3Q12968 1075 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 DOC2AQ14183 400 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 E2F2Q14209 437 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 NAA30Q147X3 362 aaPredicted RBP21.66■■□□□ 1.06
TDP1-216ENST00000556867 TBCCQ15814 346 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 SYT16Q17RD7 645 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 XKR6Q5GH73 641 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 DCAF10Q5QP82 559 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 TCTN3Q6NUS6 607 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 PRSS58Q8IYP2 241 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 EFCAB11Q9BUY7 163 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 YIPF2Q9BWQ6 316 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 ZNF358Q9NW07 568 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 PSMC3IPQ9P2W1 217 aaPredicted RBP21.66■■□□□ 1.06
TDP1-216ENST00000556867 C3orf18Q9UK00 162 aa21.66■■□□□ 1.06
TDP1-216ENST00000556867 PCDHGA9Q9Y5G4 932 aaKnown RBP21.66■■□□□ 1.06
TDP1-216ENST00000556867 SGK494L7N484 410 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 SLU7O95391 586 aaKnown RBP21.65■■□□□ 1.06
TDP1-216ENST00000556867 ALOX12P18054 663 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 CD22P20273 847 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 CASP2P42575 452 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 CCL11P51671 97 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 PCDH1Q08174 1060 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 HYAL2Q12891 473 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 RBBP7Q16576 425 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 PFKFB4Q16877 469 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 LACTB2Q53H82 288 aaPredicted RBP21.65■■□□□ 1.06
TDP1-216ENST00000556867 NIPAL1Q6NVV3 410 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 KIRREL2Q6UWL6 708 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 ABHD13Q7L211 337 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 CCDC77Q9BR77 488 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 TP53TG5Q9Y2B4 290 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 NAALAD2Q9Y3Q0 740 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 ZNF462Q96JM2 2506 aa21.65■■□□□ 1.06
TDP1-216ENST00000556867 IQANK1A0A1B0GTG1 560 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 URADA6NGE7 173 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 IDSB3KWA1 339 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 GALR3O60755 368 aaPredicted RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 RDH16O75452 317 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 BMP10O95393 424 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 ZNF888P0CJ79 500 aaPredicted RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 SKP1P63208 163 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 IRF8Q02556 426 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 CHIT1Q13231 466 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 LAPTM5Q13571 262 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 PCBP2Q15366 365 aaKnown RBP eCLIP21.64■■□□□ 1.05
TDP1-216ENST00000556867 PAGE2BQ5JRK9 111 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 METTL2BQ6P1Q9 378 aaKnown RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 LAPTM4BQ86VI4 370 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 UTP15Q8TED0 518 aaKnown RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 VPS50Q96JG6 964 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 MLXIPLQ9NP71 852 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 ZNF71Q9NQZ8 489 aaPredicted RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 HCN3Q9P1Z3 774 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 CPSF2Q9P2I0 782 aaKnown RBP21.64■■□□□ 1.05
TDP1-216ENST00000556867 XPR1Q9UBH6 696 aa21.64■■□□□ 1.05
TDP1-216ENST00000556867 FBXL4Q9UKA2 621 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms