RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OR5T3Q8NGG3 340 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 DNAJB8Q8NHS0 232 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 CAPZA3Q96KX2 299 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 SARGQ9BW04 601 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 RBCK1Q9BYM8 510 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 ABI3Q9P2A4 366 aa21.3■■□□□ 1
ACTN1-220ENST00000556433 TRBC2A0A5B9 178 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 ZG16O60844 167 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 CDC123O75794 336 aaPredicted RBP21.29■■□□□ 1
ACTN1-220ENST00000556433 ENO2P09104 434 aaPredicted RBP21.29■■□□□ 1
ACTN1-220ENST00000556433 RHAGQ02094 409 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 SRSF11Q05519 484 aaKnown RBP21.29■■□□□ 1
ACTN1-220ENST00000556433 PWP1Q13610 501 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 ABRAXAS2Q15018 415 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 EXT1Q16394 746 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 SFT2D3Q587I9 215 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 ACER2Q5QJU3 275 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 STEAP4Q687X5 459 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 H3F3CQ6NXT2 135 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 AFAP1L2Q8N4X5 818 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 ZNF740Q8NDX6 193 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 M1APQ8TC57 530 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 SLC5A11Q8WWX8 675 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 LRRC39Q96DD0 335 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 PDLIM5Q96HC4 596 aaKnown RBP21.29■■□□□ 1
ACTN1-220ENST00000556433 OR1F2PQ96R84 312 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 WDR83Q9BRX9 315 aaKnown RBP21.29■■□□□ 1
ACTN1-220ENST00000556433 IKZF3Q9UKT9 509 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 TEX264Q9Y6I9 313 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 SCN2AQ99250 2005 aa21.29■■□□□ 1
ACTN1-220ENST00000556433 DNAJB6O75190 326 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 ALOX12P18054 663 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 SAT1P21673 171 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 MST1P26927 711 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 DR1Q01658 176 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 DEFB134Q4QY38 66 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 PAPD4Q6PIY7 484 aaKnown RBP21.28■■□□□ 1
ACTN1-220ENST00000556433 TMEM207Q6UWW9 146 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 BEST3Q8N1M1 668 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 NEIL2Q969S2 332 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 RELTQ969Z4 430 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 KCNF1Q9H3M0 494 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 LANCL2Q9NS86 450 aa21.28■■□□□ 1
ACTN1-220ENST00000556433 MAGEB17A8MXT2 336 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 CHST10O43529 356 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 GALR3O60755 368 aaPredicted RBP21.27■■□□□ 1
ACTN1-220ENST00000556433 UNC5CO95185 931 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 B3GALT4O96024 378 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 SCTRP47872 440 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 ITGA8P53708 1063 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 ARL4CP56559 192 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 RGS1Q08116 209 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 MEP1AQ16819 746 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 ZNF766Q5HY98 468 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 SBSNQ6UWP8 590 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 STRA8Q7Z7C7 330 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 CRLF3Q8IUI8 442 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 ANKMY2Q8IV38 441 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 NT5CQ8TCD5 201 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 TSLPQ969D9 159 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 TBC1D20Q96BZ9 403 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 TSNARE1Q96NA8 513 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 RUNDC3BQ96NL0 473 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 LPAR4Q99677 370 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 SPNS1Q9H2V7 528 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 MMP25Q9NPA2 562 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 SEC14L3Q9UDX4 400 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 ZFP69BQ9UJL9 534 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 DYRK1BQ9Y463 629 aa21.27■■□□□ 1
ACTN1-220ENST00000556433 CROCCQ5TZA2 2017 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 FHP07954 510 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 OR4D2P58180 307 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 SKP1P63208 163 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 OLR1P78380 273 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 FRG1Q14331 258 aaKnown RBP21.26■□□□□ 0.99
ACTN1-220ENST00000556433 THOC6Q86W42 341 aaKnown RBP21.26■□□□□ 0.99
ACTN1-220ENST00000556433 CREG2Q8IUH2 290 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 TRIM51Q9BSJ1 452 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 GRPEL1Q9HAV7 217 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 ZFATQ9P243 1243 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 PSAT1Q9Y617 370 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 CPAMD8Q8IZJ3 1885 aa21.26■□□□□ 0.99
ACTN1-220ENST00000556433 MYO7BQ6PIF6 2116 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 TRGV8A0A0C4DH27 118 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 CDC7O00311 574 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 B4GALT2O60909 372 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 ZNF888P0CJ79 500 aaPredicted RBP21.25■□□□□ 0.99
ACTN1-220ENST00000556433 AHRP35869 848 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 CD96P40200 585 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 ST13P50502 369 aaKnown RBP21.25■□□□□ 0.99
ACTN1-220ENST00000556433 PMP22Q01453 160 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 MGAT5Q09328 741 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 TUBA3CQ13748 450 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 USP10Q14694 798 aaKnown RBP21.25■□□□□ 0.99
ACTN1-220ENST00000556433 NIPAL1Q6NVV3 410 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 TUBA3EQ6PEY2 450 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 ABHD13Q7L211 337 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 NKAPQ8N5F7 415 aaKnown RBP21.25■□□□□ 0.99
ACTN1-220ENST00000556433 NPAS2Q99743 824 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 UTP23Q9BRU9 249 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms