RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 C19orf53Q9UNZ5 99 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DTNAQ9Y4J8 743 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TRAF6Q9Y4K3 522 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PCDHB9Q9Y5E1 797 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DNMT3AQ9Y6K1 912 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FAM25AB3EWG3 89 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FAM25CB3EWG5 89 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FAM25GB3EWG6 89 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CDC7O00311 574 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TRIM38O00635 465 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ASNA1O43681 348 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 KLK8O60259 260 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PTP4A3O75365 173 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HOXB8P17481 243 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TYRP1P17643 537 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 LAG3P18627 525 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MAGP20916 626 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CXCR2P25025 360 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MAOBP27338 520 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 RRM2P31350 389 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GKP32189 559 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HMGCLP35914 325 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HK3P52790 923 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 MAT1AQ00266 395 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DEFA6Q01524 100 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ILF3Q12906 894 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SLC14A1Q13336 389 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DYRK1AQ13627 763 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TSNQ15631 228 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CDKN3Q16667 212 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PFKFB4Q16877 469 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GTF2IRD2BQ6EKJ0 949 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 DCDC5Q6ZRR9 648 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 FRA10AC1Q70Z53 315 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 GTF2IRD2Q86UP8 949 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CMTR2Q8IYT2 770 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 CLIP4Q8N3C7 705 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 RYBPQ8N488 228 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ARL14Q8N4G2 192 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 HJURPQ8NCD3 748 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 OR9I1Q8NGQ6 314 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PIK3R3Q92569 461 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SHDQ96IW2 340 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TPD52L3Q96J77 140 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 TM6SF2Q9BZW4 377 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 QRSL1Q9H0R6 528 aaKnown RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 P2RY12Q9H244 342 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 SPATA6Q9NWH7 488 aaPredicted RBP4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PLK2Q9NYY3 685 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 ADAMTS6Q9UKP5 1117 aa4.93□□□□□ -1.62
TMEM260-210ENST00000556422 PLXNA2O75051 1894 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 IQCF5A8MTL0 148 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 LZTS3O60299 673 aaPredicted RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 MLYCDO95822 493 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 ACRP10323 421 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 C6P13671 934 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 GABRR2P28476 465 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 EEF1DP29692 281 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 PRDX3P30048 256 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 SERPINB1P30740 379 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 CCR2P41597 374 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 OR3A3P47888 321 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 EPHB3P54753 998 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 EMP3P54852 163 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 COPZ1P61923 177 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 MS4A2Q01362 244 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TCEA2Q15560 299 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 PTPRNQ16849 979 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 LRRK1Q38SD2 2015 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 PDZK1Q5T2W1 519 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 CROCCQ5TZA2 2017 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 UGT3A1Q6NUS8 523 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 LILRA6Q6PI73 481 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 RTL4Q6ZR62 310 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 UTS2BQ765I0 119 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 LYSMD3Q7Z3D4 306 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TIPARPQ7Z3E1 657 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 FUNDC1Q8IVP5 155 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 PGAM4Q8N0Y7 254 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 OXR1Q8N573 874 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 KYQ8NBH2 561 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 SIDT2Q8NBJ9 832 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 OR4D10Q8NGI6 311 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 OR14C36Q8NHC7 312 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 S100PBPQ96BU1 408 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 CHFRQ96EP1 664 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TOE1Q96GM8 510 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 LMLNQ96KR4 655 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 SGCZQ96LD1 299 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 NPAS2Q99743 824 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 ACTR6Q9GZN1 396 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 MMP27Q9H306 513 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 EML4Q9HC35 981 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 MRPL17Q9NRX2 175 aaKnown RBP4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TAS2R13Q9NYV9 303 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TMEM210A6NLX4 147 aa4.92□□□□□ -1.62
TMEM260-210ENST00000556422 TRIM77I1YAP6 450 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms