RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SPOUT1Q5T280 376 aaKnown RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 CYB5D1Q6P9G0 228 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 SHQ1Q6PI26 577 aaKnown RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 G2E3Q7L622 706 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 OTOAQ7RTW8 1153 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 CPEB2Q7Z5Q1 589 aaKnown RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 PTAR1Q7Z6K3 402 aaPredicted RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 KLHDC1Q8N7A1 406 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 NHLRC2Q8NBF2 726 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 KBTBD8Q8NFY9 601 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 OR1L3Q8NH93 324 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 FIBINQ8TAL6 211 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 CENPTQ96BT3 561 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 PANK2Q9BZ23 570 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 SDCBP2Q9H190 292 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 C2orf40Q9H1Z8 148 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 ALDH8A1Q9H2A2 487 aaPredicted RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 PHPT1Q9NRX4 125 aaPredicted RBP2.53□□□□□ -2
SCFD1-218ENST00000556256 LIPT1Q9Y234 373 aa2.53□□□□□ -2
SCFD1-218ENST00000556256 FAM170AA1A519 330 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 YDJCA8MPS7 323 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 C17orf105B2RV13 164 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 H0YAE9 185 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 STX6O43752 255 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 TGDSO95455 350 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 C9P02748 559 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 HSP90AB1P08238 724 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 EEF2P13639 858 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 FOLR2P14207 255 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 MYL6BP14649 208 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 GP9P14770 177 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 DUTP33316 252 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 OPRL1P41146 370 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 TNNT3P45378 269 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 CALCOCO2Q13137 446 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 SRSF9Q13242 221 aaKnown RBP eCLIP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 NHSL2Q5HYW2 709 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 SLC25A47Q6Q0C1 308 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 FIP1L1Q6UN15 594 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PRSS55Q6UWB4 352 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 TMEM207Q6UWW9 146 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 LINC00696Q6ZRV3 163 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 GPR141Q7Z602 305 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 AMIGO1Q86WK6 493 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 HOGA1Q86XE5 327 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 CREBRFQ8IUR6 639 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 LACC1Q8IV20 430 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 CCDC60Q8IWA6 550 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 OR5AP2Q8NGF4 316 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 OR13C3Q8NGS6 347 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 NCOA7Q8NI08 942 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 GDAP1Q8TB36 358 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF519Q8TB69 540 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PIK3R3Q92569 461 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PYCR2Q96C36 320 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 CCDC114Q96M63 670 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PRICKLE1Q96MT3 831 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 KLHL5Q96PQ7 755 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 GAL3ST4Q96RP7 486 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PARK7Q99497 189 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 DESI2Q9BSY9 194 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PITPNM3Q9BZ71 974 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 MINDY3Q9H8M7 445 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 RAVER2Q9HCJ3 691 aaKnown RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 TUFT1Q9NNX1 390 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 NYAP2Q9P242 653 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 LEF1Q9UJU2 399 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-218ENST00000556256 ITGA11Q9UKX5 1188 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 TNNQ9UQP3 1299 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 CHKBQ9Y259 395 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 NTNG1Q9Y2I2 539 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 PPP2R2CQ9Y2T4 447 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 KLK4Q9Y5K2 254 aa2.52□□□□□ -2.01
SCFD1-218ENST00000556256 HCFC1P51610 2035 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 IL16Q14005 1332 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 IGSF1Q8N6C5 1336 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 A0A0B4J203 849 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 TMEM129A0AVI4 362 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 A4D1N5 150 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 MTMR11A4FU01 709 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ACOD1A6NK06 481 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 FPGTO14772 594 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 PSMA7O14818 248 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ST8SIA3O43173 380 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SLU7O95391 586 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SEC24AO95486 1093 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 RLN1P04808 185 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ATP1B1P05026 303 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD34CP0C6C1 535 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 F3P13726 295 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 LHCGRP22888 699 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ATP5DP30049 168 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 CTNNA1P35221 906 aaKnown RBP2.51□□□□□ -2.01
SCFD1-218ENST00000556256 MMP12P39900 470 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 SULT2A1Q06520 285 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 RBBP7Q16576 425 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD20A4Q4UJ75 823 aa2.51□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD20A8PQ5CZ79 823 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms