RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SSR3Q9UNL2 185 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 PRR23AA6NEV1 266 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 IQCF5A8MTL0 148 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 PLA2G10O15496 165 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 GSTM1P09488 218 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 TSPAN19P0C672 248 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 PSKH1P11801 424 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CTRB1P17538 263 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 RPS3P23396 243 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHD8-209ENST00000555935 DGKAP23743 735 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 OR1E1P30953 314 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CRYBB2P43320 205 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CACNG1Q06432 222 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 GGTA1PQ4G0N0 100 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 DUSP28Q4G0W2 176 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 TOR2AQ5JU69 321 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 DDI2Q5TDH0 399 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CTRB2Q6GPI1 263 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CERS6Q6ZMG9 384 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 ZNF621Q6ZSS3 439 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 NLRP8Q86W28 1048 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 AMIGO1Q86WK6 493 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 SPATA2LQ8IUW3 424 aaPredicted RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 LGI4Q8N135 537 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 DUSP18Q8NEJ0 188 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 OR6J1Q8NGC5 347 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 LRRC20Q8TCA0 184 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CREB3L4Q8TEY5 395 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 SELENOMQ8WWX9 145 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 SAMD11Q96NU1 681 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 RPRD1AQ96P16 312 aaPredicted RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 PSKH2Q96QS6 385 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 ARHGAP39Q9C0H5 1083 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 KATNBL1Q9H079 304 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHD8-209ENST00000555935 RDH14Q9HBH5 336 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 ABCB9Q9NP78 766 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 RBFOX1Q9NWB1 397 aaKnown RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 NDUFB11Q9NX14 153 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 MRPL39Q9NYK5 338 aaKnown RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 GLTPQ9NZD2 209 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 PHF11Q9UIL8 331 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 LSM2Q9Y333 95 aaKnown RBP7.5□□□□□ -1.21
CHD8-209ENST00000555935 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 HSPB11Q9Y547 144 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 ALG5Q9Y673 324 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 GJA3Q9Y6H8 435 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 PLXNB2O15031 1838 aa7.5□□□□□ -1.21
CHD8-209ENST00000555935 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 H3BM21 787 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 CXCL11O14625 94 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 INSIG1O15503 277 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 STK16O75716 305 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 B3GALT4O96024 378 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 PDYNP01213 254 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 IGHA2P01877 340 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 CYP17A1P05093 508 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 TACR1P25103 407 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 GDF5P43026 501 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 MAPK12P53778 367 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 SPIBQ01892 262 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 SMARCB1Q12824 385 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 BOP1Q14137 746 aaKnown RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 DSC3Q14574 896 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 SPHARQ15513 63 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 UPP1Q16831 310 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 PYDC2Q56P42 97 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 RNLSQ5VYX0 342 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 PTRHD1Q6GMV3 140 aaKnown RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 LAMTOR1Q6IAA8 161 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 ZNF598Q86UK7 904 aaKnown RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 LRRTM3Q86VH5 581 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 THEM5Q8N1Q8 247 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 CAMKK1Q8N5S9 505 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 VANGL1Q8TAA9 524 aaPredicted RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 SPPL2AQ8TCT8 520 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 AP3S1Q92572 193 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 DIRAS2Q96HU8 199 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 DPH2Q9BQC3 489 aaPredicted RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 CINPQ9BW66 212 aaPredicted RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 MND1Q9BWT6 205 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 APOL5Q9BWW9 433 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 ADGRE3Q9BY15 652 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 PRRG3Q9BZD7 231 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 MIXL1Q9H2W2 232 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 TRIM45Q9H8W5 580 aaPredicted RBP7.49□□□□□ -1.21
CHD8-209ENST00000555935 TMEM184CQ9NVA4 438 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 MAT2BQ9NZL9 334 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 SCML2Q9UQR0 700 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 ITM2BQ9Y287 266 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 PCDHB11Q9Y5F2 797 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 AUP1Q9Y679 476 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 ARRDC5A6NEK1 342 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 CASTOR2A6NHX0 329 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 SNTNA6NMZ2 147 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 MYL12BO14950 172 aa7.49□□□□□ -1.21
CHD8-209ENST00000555935 AKR7A2O43488 359 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms