RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PCYOX1LQ8NBM8 494 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 OR52B6Q8NGF0 335 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CFAP61Q8NHU2 1237 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TSPEARQ8WU66 669 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 FBXL8Q96CD0 374 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 RCN3Q96D15 328 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 PPP3R2Q96LZ3 170 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 C3orf30Q96M34 536 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CCDC138Q96M89 665 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CAMK1GQ96NX5 476 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SMAD5Q99717 465 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 GABRG3Q99928 467 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM79Q9BSE2 394 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 OR2AG1Q9H205 316 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TUBB1Q9H4B7 451 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 DENND2DQ9H6A0 471 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ACTR8Q9H981 624 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 ZDHHC4Q9NPG8 344 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 AASDHPPTQ9NRN7 309 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 DNAJC11Q9NVH1 559 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM45AQ9NWC5 275 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 EBF1Q9UH73 591 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 POLG2Q9UHN1 485 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 CNOT6Q9ULM6 557 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 PRPF19Q9UMS4 504 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SCML1Q9UN30 329 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 INVSQ9Y283 1065 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 NCKAP1Q9Y2A7 1128 aa6.59□□□□□ -1.35
SLIRP-204ENST00000555890 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.59□□□□□ -1.35
SLIRP-204ENST00000555890 TGP01266 2768 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 A0A088AWK7 358 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 TCRBV16S1A1N1A0A5B0 115 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 MEGF11A6BM72 1044 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ANTXRLA6NF34 631 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 MGAT4DA6NG13 374 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 IGLON5A6NGN9 336 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 A8MUI8 341 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 CLGNO14967 610 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SHOXO15266 292 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 CFLARO15519 480 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 NRP2O60462 931 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PEX11AO75192 247 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ULK1O75385 1050 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PSIP1O75475 530 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 POP7O75817 140 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SOD1P00441 154 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PRR35P0CG20 571 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 HOXB2P14652 356 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ENGP17813 658 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GPX3P22352 226 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PBLDP30039 288 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 HOXC12P31275 282 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 DRD3P35462 400 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GDF5P43026 501 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SLC6A12P48065 614 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 MRPL19P49406 292 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GFRA1P56159 465 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ERVK-8P63133 956 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 RPS21P63220 83 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 EMX2Q04743 252 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 TBL3Q12788 808 aaKnown RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 TRAF3Q13114 568 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PTK2BQ14289 1009 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GRB7Q14451 532 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 IMPG1Q17R60 797 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 SMU1Q2TAY7 513 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 XKR7Q5GH72 579 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 TMEM196Q5HYL7 178 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 C6orf136Q5SQH8 315 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 C1orf146Q5VVC0 180 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GTF2IRD2BQ6EKJ0 949 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 KIAA1161Q6NSJ0 714 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 LETMD1Q6P1Q0 360 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PNCKQ6P2M8 343 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 NEK5Q6P3R8 708 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PGM2L1Q6PCE3 622 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 GTF2IRD2Q86UP8 949 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ZBTB46Q86UZ6 589 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 LRRTM4Q86VH4 590 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 KIF18BQ86Y91 864 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 MYLK4Q86YV6 388 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 TRAPPC5Q8IUR0 188 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 RASGRP3Q8IV61 690 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 VRK3Q8IV63 474 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 CFAP206Q8IYR0 622 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 DSELQ8IZU8 1212 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 PGAM4Q8N0Y7 254 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 FBXW8Q8N3Y1 598 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 AADATQ8N5Z0 425 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 FBXO15Q8NCQ5 510 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 ADCY4Q8NFM4 1077 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 HM13Q8TCT9 377 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 DLG3Q92796 817 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 LINC00615Q96LM1 132 aaPredicted RBP6.58□□□□□ -1.36
SLIRP-204ENST00000555890 YIPF4Q9BSR8 244 aa6.58□□□□□ -1.36
SLIRP-204ENST00000555890 DCLRE1BQ9H816 532 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms