RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 TSPYL1Q9H0U9 437 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 ANKHQ9HCJ1 492 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 SNX15Q9NRS6 342 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 CD274Q9NZQ7 290 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 PTBP2Q9UKA9 531 aaKnown RBP19.41■□□□□ 0.7
VTI1B-205ENST00000555543 NBASA2RRP1 2371 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 MAP2K7O14733 419 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 PRAMEF4O60810 478 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 ALDOAP04075 364 aaKnown RBP19.4■□□□□ 0.7
VTI1B-205ENST00000555543 C2P06681 752 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 HEXBP07686 556 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 COX6A1P12074 109 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 GNAZP19086 355 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 ITGA3P26006 1051 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 AHRP35869 848 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 XCR1P46094 333 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 CD97P48960 835 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 EEF1A2Q05639 463 aaKnown RBP19.4■□□□□ 0.7
VTI1B-205ENST00000555543 HYAL2Q12891 473 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 PRAMEF9Q5VWM5 478 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 SULT1C3Q6IMI6 304 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 TBC1D19Q8N5T2 526 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 RBMXL3Q8N7X1 1067 aaKnown RBP19.4■□□□□ 0.7
VTI1B-205ENST00000555543 OR5T3Q8NGG3 340 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 OR51Q1Q8NH59 317 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 VN1R1Q9GZP7 353 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 AICDAQ9GZX7 198 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 NMRAL1Q9HBL8 299 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 DNAJC11Q9NVH1 559 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 MKL2Q9ULH7 1088 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 ACOT9Q9Y305 439 aa19.4■□□□□ 0.7
VTI1B-205ENST00000555543 DOCK10Q96BY6 2186 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 C4orf51C9J302 202 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 UBXN8O00124 270 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 DNAJB6O75190 326 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 STK16O75716 305 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 IPO13O94829 963 aaKnown RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 HPP00738 406 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 ZNF888P0CJ79 500 aaPredicted RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 C1GALT1C1LP0DN25 315 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 RGS1Q08116 209 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 SLBPQ14493 270 aaKnown RBP eCLIP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 RBBP5Q15291 538 aaKnown RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 DEFB134Q4QY38 66 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 PARP9Q8IXQ6 854 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 AMER2Q8N7J2 671 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 UHMK1Q8TAS1 419 aaKnown RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 STAG3L4Q8TBR4 150 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 CREB3L4Q8TEY5 395 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 SLC44A1Q8WWI5 657 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 MFRPQ9BY79 579 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 SLC6A16Q9GZN6 736 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 CNOT10Q9H9A5 744 aaKnown RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 ZBTB20Q9HC78 741 aaPredicted RBP19.39■□□□□ 0.69
VTI1B-205ENST00000555543 ZNF160Q9HCG1 818 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 NFU1Q9UMS0 254 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 FLNCQ14315 2725 aa19.39■□□□□ 0.69
VTI1B-205ENST00000555543 A0A1W2PQ72 361 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 OR2W5A6NFC9 320 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 SUPT3HB4E1H0 165 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 GALR3O60755 368 aaPredicted RBP19.38■□□□□ 0.69
VTI1B-205ENST00000555543 DPM1O60762 260 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 KERAO60938 352 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 SUPT3HO75486 399 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 WISP1O95388 367 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 ALOX12P18054 663 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 EPORP19235 508 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 HNF4AP41235 474 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 AGTR2P50052 363 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 SERPINB8P50452 374 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 MLLT10P55197 1068 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 HERC3Q15034 1050 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 TMEM205Q6UW68 189 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 SNX31Q8N9S9 440 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 UTP15Q8TED0 518 aaKnown RBP19.38■□□□□ 0.69
VTI1B-205ENST00000555543 PAFAH2Q99487 392 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 RBCK1Q9BYM8 510 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 KLHL31Q9H511 634 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 GPRC5BQ9NZH0 403 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 NUDT4Q9NZJ9 180 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 LUZP4Q9P127 313 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 C5AR2Q9P296 337 aa19.38■□□□□ 0.69
VTI1B-205ENST00000555543 A0A087X1B8 175 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 A0A096LPK6 155 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 IGHV1-45A0A0A0MS14 117 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 CCNT2O60583 730 aaKnown RBP19.37■□□□□ 0.69
VTI1B-205ENST00000555543 SORBS2O94875 1100 aaKnown RBP19.37■□□□□ 0.69
VTI1B-205ENST00000555543 ZIC2O95409 532 aaPredicted RBP19.37■□□□□ 0.69
VTI1B-205ENST00000555543 S100BP04271 92 aaPredicted RBP19.37■□□□□ 0.69
VTI1B-205ENST00000555543 RHOXF2BP0C7M4 288 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 MTHFD2P13995 350 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 CD22P20273 847 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 GLRBP48167 497 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 OLR1P78380 273 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 IGFBP7Q16270 282 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 PDK4Q16654 411 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 SLC6A19Q695T7 634 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 JMJD6Q6NYC1 403 aaPredicted RBP19.37■□□□□ 0.69
VTI1B-205ENST00000555543 LANCL3Q6ZV70 420 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms