RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PRAMEF17Q5VTA0 474 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ADNP2Q6IQ32 1131 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF517Q6ZMY9 492 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 RNF165Q6ZSG1 346 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CUZD1Q86UP6 607 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 DTX1Q86Y01 620 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MYLK4Q86YV6 388 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 TMEM126BQ8IUX1 230 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CLYBLQ8N0X4 340 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 AFAP1L2Q8N4X5 818 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CDYL2Q8N8U2 506 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 TTC29Q8NA56 475 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SLC38A9Q8NBW4 561 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 KCT2Q8NC54 265 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 METTL6Q8TCB7 284 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MVB12AQ96EY5 273 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 NDC1Q9BTX1 674 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MS4A8Q9BY19 250 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 NLNQ9BYT8 704 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 C20orf27Q9GZN8 174 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 AICDAQ9GZX7 198 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MANSC1Q9H8J5 431 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ACTR5Q9H9F9 607 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 TNFRSF12AQ9NP84 129 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 STARD5Q9NSY2 213 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CUTCQ9NTM9 273 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 INTS9Q9NV88 658 aaKnown RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 FOXJ2Q9P0K8 574 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ANGPTL2Q9UKU9 493 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 AK5Q9Y6K8 562 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MDC1Q14676 2089 aaKnown RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 WDFY3Q8IZQ1 3526 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 SPTBN2O15020 2390 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 MED19A0JLT2 244 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 URADA6NGE7 173 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 MAGEB17A8MXT2 336 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 NDUFS4O43181 175 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 CPNE3O75131 537 aaKnown RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ULK1O75385 1050 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 STK17BO94768 372 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 KRT6AP02538 564 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 KRT6BP04259 564 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 CAPNS1P04632 268 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 UROSP10746 265 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 HSD3B1P14060 373 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 PTX3P26022 381 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 HSD3B2P26439 372 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 SLC1A6P48664 564 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 KRT6CP48668 564 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 NEK2P51955 445 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 FOXA1P55317 472 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 BST1Q10588 318 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 IFT88Q13099 833 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 CUL3Q13618 768 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 NDUFA9Q16795 377 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 TBC1D25Q3MII6 688 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 UGT3A2Q3SY77 523 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 DEPDC1Q5TB30 811 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ATG16L1Q676U5 607 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 PROKR1Q8TCW9 393 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF75CPQ92670 426 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 GATA6Q92908 595 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 MS4A6EQ96DS6 147 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 CMTM7Q96FZ5 175 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 C10orf90Q96M02 699 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 SORT1Q99523 831 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 MACROD1Q9BQ69 325 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 DPH2Q9BQC3 489 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ULBP3Q9BZM4 244 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 BRF2Q9HAW0 419 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 DMRT3Q9NQL9 472 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 THAP1Q9NVV9 213 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 ZDHHC2Q9UIJ5 367 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 TRAF6Q9Y4K3 522 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 SPTBP11277 2137 aa12.07□□□□□ -0.48
SYNE2-219ENST00000555323 H0YIG0 161 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 MEN1O00255 615 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 MANBAO00462 879 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 FFAR3O14843 346 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 DSCR3O14972 297 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 AZIN1O14977 448 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 GPR42O15529 346 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 FOXS1O43638 330 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 KIAA0754O94854 1291 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 MED26O95402 600 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 NTRK1P04629 796 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 PCNAP12004 261 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 NEFHP12036 1026 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 HMOX2P30519 316 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 STXBP1P61764 594 aaKnown RBP12.06□□□□□ -0.48
SYNE2-219ENST00000555323 CYP4F2P78329 520 aa12.06□□□□□ -0.48
SYNE2-219ENST00000555323 PHEXP78562 749 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms