RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CYTIPO60759 359 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 AMBPP02760 352 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 GOT1P17174 413 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 HLA-DPA1P20036 260 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR3A2P47893 321 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 NME5P56597 212 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 GNB1P62873 340 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 SP3Q02447 781 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ACTN3Q08043 901 aaPredicted RBP4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 RPA4Q13156 261 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 PPP2R5CQ13362 524 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ITGA9Q13797 1035 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 HNRNPDQ14103 355 aaKnown RBP4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 EFTUD2Q15029 972 aaKnown RBP eCLIP4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 RPS6KA1Q15418 735 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 SGSM1Q2NKQ1 1148 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 AARDQ4LEZ3 155 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ARHGAP17Q68EM7 881 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR4C11Q6IEV9 310 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 DHRS11Q6UWP2 260 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 BTN2A1Q7KYR7 527 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAPK15Q8TD08 544 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 BCL2L2Q92843 193 aaPredicted RBP4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 CFAP36Q96G28 342 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAGED4Q96JG8 741 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 NECTIN4Q96NY8 510 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ZNF559Q9BR84 538 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 PIGQQ9BRB3 760 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 DPEP2Q9H4A9 486 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 C5orf66Q9H5L9 145 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 MRPL17Q9NRX2 175 aaKnown RBP4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 TMOD3Q9NYL9 352 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 DISP3Q9P2K9 1392 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 MYH14Q7Z406 1995 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 A0A087X0K7 114 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 CACNB4O00305 520 aaPredicted RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 KIF5CO60282 957 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 LETM1O95202 739 aaPredicted RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAGEB1P43366 347 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 LEPRP48357 1165 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 SERPINH1P50454 418 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 PAX9P55771 341 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR1D5P58170 312 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 SNRPD1P62314 119 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 GUCY2DQ02846 1103 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 SLC3A1Q07837 685 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 TMEM132DQ14C87 1099 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 IFI44LQ53G44 452 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 KCTD11Q693B1 232 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 FIP1L1Q6UN15 594 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 USP43Q70EL4 1123 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 HOGA1Q86XE5 327 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 ZNF444Q8N0Y2 327 aaPredicted RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 TCEANCQ8N8B7 351 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR5T2Q8NGG2 359 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR6S1Q8NH40 331 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 SMAP2Q8WU79 429 aaPredicted RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 ATP6V0A1Q93050 837 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 NXPE2Q96DL1 559 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 GMPPAQ96IJ6 420 aaPredicted RBP4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 IL12RB2Q99665 862 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 OSBPL8Q9BZF1 889 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 SLC39A8Q9C0K1 460 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 PNPLA3Q9NST1 481 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 COMMD8Q9NX08 183 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 RNF186Q9NXI6 227 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 POLKQ9UBT6 870 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAD2L2Q9UI95 211 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 KNSTRNQ9Y448 316 aa4.74□□□□□ -1.65
CKS1BP1-201ENST00000555221 A0A0A6YYC8 382 aaPredicted RBP4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAGEB16A2A368 324 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 I3L1I5 382 aaPredicted RBP4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 M0R296 226 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 SLC1A7O00341 560 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 SAP30O75446 220 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 CLN5O75503 358 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 AKAP3O75969 853 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 SBK2P0C263 348 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 NPRL3Q12980 569 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 CDH18Q13634 790 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 GRB14Q14449 540 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 MAPK11Q15759 364 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 STXBP2Q15833 593 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 SGCBQ16585 318 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRAMEF8Q5VWM4 474 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 PTAR1Q7Z6K3 402 aaPredicted RBP4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 KLHDC8BQ8IXV7 354 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 TDHQ8IZJ6 230 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 DCLK2Q8N568 766 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 CCDC185Q8N715 623 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 NAT8LQ8N9F0 302 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 RNF149Q8NC42 400 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 OR4D10Q8NGI6 311 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 AZIN2Q96A70 460 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 RFT1Q96AA3 541 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 ACAT2Q9BWD1 397 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
CKS1BP1-201ENST00000555221 DBNDD1Q9H9R9 158 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms