RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SREK1Q8WXA9 508 aaKnown RBP10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TM4SF19Q96DZ7 209 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 PHF21BQ96EK2 531 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 WDR34Q96EX3 536 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 IP6K3Q96PC2 410 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 GBP5Q96PP8 586 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SMC6Q96SB8 1091 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TMEM79Q9BSE2 394 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 TRIM4Q9C037 500 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 DRC3Q9H069 523 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF304Q9HCX3 659 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 XPR1Q9UBH6 696 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 LGALS13Q9UHV8 139 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 STK38LQ9Y2H1 464 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 SLC22A7Q9Y694 548 aa10.1□□□□□ -0.79
TMEM260-206ENST00000555046 A0A088AWK7 358 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 LOC101059948A0A1B0GTJ6 334 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 A0A1W2PPM1 405 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 FEZF1A0PJY2 475 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GOLGA6L10A6NI86 522 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 H0YIG0 161 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 H3BQF6 201 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GOLGA8RI6L899 631 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 EFSO43281 561 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 HCRTR1O43613 425 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 LCMT2O60294 686 aaKnown RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 IGHEP01854 428 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 LIFP15018 202 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF10P21506 573 aaPredicted RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 IL10P22301 178 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 BCL6P41182 706 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 NFKB2Q00653 900 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 REEP5Q00765 189 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 SLC18A2Q05940 514 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 CHIT1Q13231 466 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 DNASE1L3Q13609 305 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GTF2H2Q13888 395 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 SSPNQ14714 243 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 C18orf21Q32NC0 220 aaPredicted RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 KRT71Q3SY84 523 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 PRAMEF17Q5VTA0 474 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 C1orf189Q5VU69 101 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 MLIPQ5VWP3 458 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GTF2H2CQ6P1K8 395 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 MED27Q6P2C8 311 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 CHSY3Q70JA7 882 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 OVCH1Q7RTY7 1134 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GPR155Q7Z3F1 870 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 IQCKQ8N0W5 287 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 PTGR2Q8N8N7 351 aaPredicted RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 NT5CQ8TCD5 201 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 MZB1Q8WU39 189 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 CT55Q8WUE5 264 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 THAP4Q8WY91 577 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ESAMQ96AP7 390 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 FKBP10Q96AY3 582 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 RUFY1Q96T51 708 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 CENPKQ9BS16 269 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 CHST8Q9H2A9 424 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 IPPKQ9H8X2 491 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ACTR8Q9H981 624 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ANKHQ9HCJ1 492 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 STARD5Q9NSY2 213 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF358Q9NW07 568 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 GEMIN8Q9NWZ8 242 aaKnown RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 TMEM216Q9P0N5 145 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 COPG2Q9UBF2 871 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 DHCR7Q9UBM7 475 aaKnown RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF282Q9UDV7 671 aaPredicted RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 IL17BQ9UHF5 180 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
TMEM260-206ENST00000555046 PCDHGA11Q9Y5H2 935 aa10.09□□□□□ -0.79
TMEM260-206ENST00000555046 PCDH17O14917 1159 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 NDUFS4O43181 175 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CLEC3AO75596 197 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CREG1O75629 220 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 WFS1O76024 890 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CLDN9O95484 217 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 MLYCDO95822 493 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 OTCP00480 354 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 ITGB2P05107 769 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 SERPIND1P05546 499 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 MYL2P10916 166 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 IMPDH1P20839 514 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 EEF1DP29692 281 aaKnown RBP10.08□□□□□ -0.8
TMEM260-206ENST00000555046 GMPRP36959 345 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 ARL1P40616 181 aaPredicted RBP10.08□□□□□ -0.8
TMEM260-206ENST00000555046 GCGRP47871 477 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 AGTR2P50052 363 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CCNG1P51959 295 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 PRKAA2P54646 552 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 HERVK_113P63132 956 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CXADRP78310 365 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 RHDQ02161 417 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 DOC2AQ14183 400 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
TMEM260-206ENST00000555046 NCF4Q15080 339 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
TMEM260-206ENST00000555046 FAM199XQ6PEV8 388 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms