RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 EXTL3O43909 919 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 KIF5CO60282 957 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 RAD51DO75771 328 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 CDC123O75794 336 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 BAG2O95816 211 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 OLFM2O95897 454 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 CLPTM1O96005 669 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 CD59P13987 128 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 EZRP15311 586 aaKnown RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 GNB3P16520 340 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 ITGA3P26006 1051 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 GJB2P29033 226 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 SRD5A2P31213 254 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 HILS1P60008 231 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM132DQ14C87 1099 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 MAPK11Q15759 364 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 PKN2Q16513 984 aaKnown RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 KIAA1644Q3SXP7 199 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 XKR6Q5GH73 641 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 FFAR4Q5NUL3 377 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 KLHL10Q6JEL2 608 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 ARHGAP11AQ6P4F7 1023 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 SLC24A5Q71RS6 500 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 BTN2A1Q7KYR7 527 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 NOTCH2NLQ7Z3S9 236 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 PTAR1Q7Z6K3 402 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 RCOR2Q8IZ40 523 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM178AQ8NBL3 297 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 APOBEC4Q8WW27 367 aaKnown RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 CKAP2Q8WWK9 683 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 BCL2L2Q92843 193 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 TSSK2Q96PF2 358 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 RASL10BQ96S79 203 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 ATP6V0BQ99437 205 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 CDCA3Q99618 268 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 PRMT1Q99873 361 aaKnown RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 FSD1Q9BTV5 496 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 UBQLN3Q9H347 655 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 DPEP2Q9H4A9 486 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 C10orf88Q9H8K7 445 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 PPANQ9NQ55 473 aaKnown RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 FLRT3Q9NZU0 649 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 C19orf25Q9UFG5 118 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-213ENST00000554776 AGTPBP1Q9UPW5 1226 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 C2CD2Q9Y426 696 aa2.75□□□□□ -1.97
SCFD1-213ENST00000554776 GPRASP1Q5JY77 1395 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 MYH14Q7Z406 1995 aaKnown RBP2.74□□□□□ -1.97
SCFD1-213ENST00000554776 A0A087X0K7 114 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 A0A0G2JLW4 131 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 SYCE3A1L190 88 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CYSRT1A8MQ03 144 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 C2CD4DB7Z1M9 353 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 NPIPA3F8WFD2 350 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GLRA3O75311 464 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GMNNO75496 209 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CDK2AP2O75956 126 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 PNPP00491 289 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 MT-ND2P03891 347 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 EDN1P05305 212 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 NUDT17P0C025 328 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GP1BBP13224 206 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CPA3P15088 417 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 NT5C2P49902 561 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CLDN17P56750 224 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 HERV-K104P61576 105 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GALK2Q01415 458 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 MYL7Q01449 175 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CETN1Q12798 172 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 CDH18Q13634 790 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 ZNF789Q5FWF6 425 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 KCTD11Q693B1 232 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 RAB12Q6IQ22 244 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 DHRS11Q6UWP2 260 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 TOM1L2Q6ZVM7 507 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 G2E3Q7L622 706 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 PRSS42Q7Z5A4 293 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GPR141Q7Z602 305 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 PRUNE1Q86TP1 453 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 LACC1Q8IV20 430 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 SIAH3Q8IW03 269 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 THEM5Q8N1Q8 247 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 TCEANCQ8N8B7 351 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 GPRC5AQ8NFJ5 357 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 OR8H1Q8NGG4 311 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 OR1L3Q8NH93 324 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 SUSD6Q92537 303 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 C5orf30Q96GV9 206 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 LRR1Q96L50 414 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 C10orf90Q96M02 699 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 C17orf62Q9BQA9 187 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 BARHL1Q9BZE3 327 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 TRIM7Q9C029 511 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 FAM49AQ9H0Q0 323 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-213ENST00000554776 RPF1Q9H9Y2 349 aaKnown RBP2.74□□□□□ -1.97
SCFD1-213ENST00000554776 FAM212BQ9NTI7 297 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-213ENST00000554776 INTS10Q9NVR2 710 aaKnown RBP2.74□□□□□ -1.97
SCFD1-213ENST00000554776 EPHA6Q9UF33 1036 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 SLC12A6Q9UHW9 1150 aa2.74□□□□□ -1.97
SCFD1-213ENST00000554776 MOSPD1Q9UJG1 213 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms