RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 RAB21Q9UL25 225 aa12.26□□□□□ -0.45
MTHFD1-209ENST00000554768 TNPO3Q9Y5L0 923 aaKnown RBP12.26□□□□□ -0.45
MTHFD1-209ENST00000554768 H0YIG0 161 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 GOLGA8RI6L899 631 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 PRPF4O43172 522 aaKnown RBP eCLIP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SIX3O95343 332 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 NSA2O95478 260 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SERPIND1P05546 499 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SERPINA6P08185 405 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 ZGLP1P0C6A0 271 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 FAM87AP0C7U9 286 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SMIM10L1P0DMW3 83 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 PYGBP11216 843 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 EPB42P16452 691 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 IRF8Q02556 426 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 CHIT1Q13231 466 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 VWA2Q5GFL6 755 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 METTL2BQ6P1Q9 378 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SHISA6Q6ZSJ9 500 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 VN1R5Q7Z5H4 357 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SHISA5Q8N114 240 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 KRT78Q8N1N4 520 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 PTGR2Q8N8N7 351 aaPredicted RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 OR2W6PQ8NHA6 318 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 STT3BQ8TCJ2 826 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 EPS8L3Q8TE67 593 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 NACC2Q96BF6 587 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 PTCD3Q96EY7 689 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SMIM10Q96HG1 83 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SEC16BQ96JE7 1060 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 ARHGAP9Q9BRR9 750 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 EFCAB11Q9BUY7 163 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 TGIF2Q9GZN2 237 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 SLC6A16Q9GZN6 736 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 RHBGQ9H310 441 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 TRPC4Q9UBN4 977 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 NXT1Q9UKK6 140 aaKnown RBP12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 TMCO1Q9UM00 188 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 MAN2B2Q9Y2E5 1009 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 NAALAD2Q9Y3Q0 740 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 HEATR5BQ9P2D3 2071 aa12.25□□□□□ -0.45
MTHFD1-209ENST00000554768 STX16-NPEPL1H3BU86 382 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 SGK494L7N484 410 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 TK2O00142 265 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 E2F3O00716 465 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 STX16O14662 325 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 FFAR3O14843 346 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 GPR42O15529 346 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 GALR3O60755 368 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 CDH16O75309 829 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 TBX6O95947 436 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 ALOX12P18054 663 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 IL1RNP18510 177 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 GSTM2P28161 218 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 OTX2P32243 289 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 POLE2P56282 527 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 MAT1AQ00266 395 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 OCA2Q04671 838 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 KLC1Q07866 573 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 RGS1Q08116 209 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 LAPTM5Q13571 262 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 LY6DQ14210 128 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 HERC3Q15034 1050 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 SYT16Q17RD7 645 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 PAGE2BQ5JRK9 111 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 ADNP2Q6IQ32 1131 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 ANKRD12Q6UB98 2062 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 RAB43Q86YS6 212 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 APLFQ8IW19 511 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 TTLQ8NG68 377 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 ZCCHC10Q8TBK6 192 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 UTP15Q8TED0 518 aaKnown RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 MIEF2Q96C03 454 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 PHF21BQ96EK2 531 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 YIPF2Q9BWQ6 316 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 KLHL31Q9H511 634 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 SOX17Q9H6I2 414 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 ANKHQ9HCJ1 492 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 MKKSQ9NPJ1 570 aaPredicted RBP12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 DCDC2Q9UHG0 476 aa12.24□□□□□ -0.45
MTHFD1-209ENST00000554768 LRIT2A6NDA9 550 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 DNAJB6O75190 326 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 SMIM24O75264 130 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 CLEC3AO75596 197 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 KLHL18O94889 574 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 B3GALT4O96024 378 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 TUBBP07437 444 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 GSTA1P08263 222 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 ZNF888P0CJ79 500 aaPredicted RBP12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 KRT15P19012 456 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 MMP11P24347 488 aa12.23□□□□□ -0.45
MTHFD1-209ENST00000554768 EEF1DP29692 281 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms