RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DNAJC5Q9H3Z4 198 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 EIF3KQ9UBQ5 218 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IGHV3-20A0A0C4DH32 117 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NPIPA5E9PKD4 350 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 INSIG1O15503 277 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MYCLP1P12525 358 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RPP30P78346 268 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FAM153CQ494X1 144 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CLEC6AQ6EIG7 209 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SLC39A4Q6P5W5 647 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IL20RBQ6UXL0 311 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 UBAC2Q8NBM4 344 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FRZBQ92765 325 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CDK15Q96Q40 435 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NPIPA1Q9UND3 350 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 H0YGN5 161 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 UGT2B17O75795 530 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DDX6P26196 483 aaKnown RBP eCLIP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GCNT1Q02742 428 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GAS6Q14393 721 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF585AQ6P3V2 769 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 METTL3Q86U44 580 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DTD1Q8TEA8 209 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GLYATL2Q8WU03 294 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 HDAC10Q969S8 669 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FBXL18Q96ME1 805 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SARGQ9BW04 601 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RABL2AQ9UBK7 228 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PCDHGA1Q9Y5H4 931 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CPS1P31327 1500 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1W2PQ72 361 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM253P0C7T8 217 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DGKGP49619 791 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MCL1Q07820 350 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PTPRRQ15256 657 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PTCHD3Q3KNS1 767 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZACNQ401N2 412 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR56A4Q8NGH8 313 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SCAMP5Q8TAC9 235 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 C3orf14Q9HBI5 128 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 UBE2J1Q9Y385 318 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TRAV6A0A075B6T7 132 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 A0A0A6YYK5 440 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SOCS5O75159 536 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NPR3P17342 541 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ACVR2AP27037 513 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 HABP2Q14520 560 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR8G1Q15617 311 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 UNC5AQ6ZN44 842 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR5AS1Q8N127 324 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 C11orf42Q8N5U0 333 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 B3GNT2Q9NY97 397 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF282Q9UDV7 671 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PTBP2Q9UKA9 531 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PTPRQQ9UMZ3 2332 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ADRA1DP25100 572 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CORO1AP31146 461 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CLCN7P51798 805 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ITGA1P56199 1179 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FAM219BQ5XKK7 198 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TTC27Q6P3X3 843 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DDX1Q92499 740 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 INTS12Q96CB8 462 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF681Q96N22 645 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SERPINB11Q96P15 392 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR10A4Q9H209 315 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SEMA6BQ9H3T3 888 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AGPAT3Q9NRZ7 376 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PCDHGB5Q9Y5G0 923 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZFYVE9O95405 1425 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 LOC110117498-PIK3R3F6TDL0 507 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FOXD2O60548 495 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 BEST1O76090 585 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IL18RAPO95256 599 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SERPINA7P05543 415 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CLCNKBP51801 687 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FRG1Q14331 258 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GRTP1Q5TC63 336 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GJD3Q8N144 294 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DEPDC4Q8N2C3 294 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 METTL4Q8N3J2 472 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PIK3R3Q92569 461 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GINS3Q9BRX5 216 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IRAK3Q9Y616 596 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TRAV39A0A0B4J263 110 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 HAT1O14929 419 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 KIAA0513O60268 411 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 B3GALNT1O75752 331 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 EDN1P05305 212 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TACR2P21452 398 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GABRB2P47870 512 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZXDBP98169 803 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GPR107Q5VW38 600 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PAPD7Q5XG87 772 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DESI1Q6ICB0 168 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR5J2Q8NH18 312 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ACTL9Q8TC94 416 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PLPPR2Q96GM1 343 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms