RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ADKP55263 362 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 IRX4P78413 519 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ARHGAP8P85298 464 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MC2RQ01718 297 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 DSC1Q08554 894 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SIGLEC14Q08ET2 396 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 GALEQ14376 348 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 KRT81Q14533 505 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SMCO1Q147U7 214 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 STARD3Q14849 445 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MFSD13AQ14CX5 517 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CA9Q16790 459 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 NADK2Q4G0N4 442 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SLC9B1Q4ZJI4 515 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 C2CD6Q53TS8 623 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF805Q5CZA5 627 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF569Q5MCW4 686 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ATF7IP2Q5U623 682 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 LIPNQ5VXI9 398 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CXorf57Q6NSI4 855 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RPUSD3Q6P087 351 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZFP1Q6P2D0 407 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF767PQ75MW2 155 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TRAPPC11Q7Z392 1133 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PRSS42Q7Z5A4 293 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CLNKQ7Z7G1 428 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CROCCP2Q86T23 111 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 HORMAD1Q86X24 394 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZFAND4Q86XD8 727 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM139Q8IV31 216 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 NUDCD3Q8IVD9 361 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 THNSL1Q8IYQ7 743 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ENTHD1Q8IYW4 607 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF781Q8N8C0 355 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 VGLL2Q8N8G2 317 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PDPRQ8NCN5 879 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 LINC00301Q8NCQ3 95 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 OR8K5Q8NH50 307 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RP9Q8TA86 221 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RNASE11Q8TAA1 199 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF671Q8TAW3 534 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PNPT1Q8TCS8 783 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF398Q8TD17 642 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ST7LQ8TDW4 575 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 HTR3CQ8WXA8 447 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PIGKQ92643 395 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TNFRSF14Q92956 283 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 NXPE2Q96DL1 559 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PABPC5Q96DU9 382 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 C12orf42Q96LP6 360 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 DACH2Q96NX9 599 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 FCRL4Q96PJ5 515 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PAPOLGQ9BWT3 736 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM120AQ9BXJ8 343 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 Q9H521 79 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF696Q9H7X3 374 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MINDY3Q9H8M7 445 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 NT5MQ9NPB1 228 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 KCND2Q9NZV8 630 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SERPINB13Q9UIV8 391 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PCDHGB4Q9UN71 923 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PLCL2Q9UPR0 1127 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 AURKCQ9UQB9 309 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MAN2B2Q9Y2E5 1009 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 NAALAD2Q9Y3Q0 740 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ASB4Q9Y574 426 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CPQQ9Y646 472 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TRIP12Q14669 1992 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TNKSO95271 1327 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF532Q9HCE3 1301 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SCN10AQ9Y5Y9 1956 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 OR6C75A6NL08 312 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SMIM23A6NLE4 172 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 FOXO6A8MYZ6 492 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 KCNJ18B7U540 433 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 LOC110117498-PIK3R3F6TDL0 507 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ABCD4O14678 606 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TSPAN4O14817 238 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ATP2A1O14983 1001 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MSI1O43347 362 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 AKR7A2O43488 359 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SLC25A17O43808 307 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RNASEH1O60930 286 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 NDUFS2O75306 463 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 VPS4BO75351 444 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GPX5O75715 221 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ZWINTO95229 277 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PGLSO95336 258 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PSMG1O95456 288 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GGPS1O95749 300 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MBP02144 154 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TNNC2P02585 160 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PRKCGP05129 697 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SERPINA5P05154 406 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms