RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 F8W8V4 182 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 NPIPA3F8WFD2 350 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 KIF5CO60282 957 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 DNAJB6O75190 326 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 PDE9AO76083 593 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 SLC16A8O95907 504 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 ENDOUP21128 410 aaKnown RBP8.45□□□□□ -1.06
PRKCH-208ENST00000553846 ARNTP27540 789 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 GDF10P55107 478 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 DCAF7P61962 342 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 NDUFA9Q16795 377 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 MFSD4BQ5TF39 518 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 TTC23LQ6PF05 361 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 CHSY3Q70JA7 882 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 SPNS2Q8IVW8 549 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 RAB42Q8N4Z0 105 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 OR5T3Q8NGG3 340 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 OR52K1Q8NGK4 314 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 OR5M9Q8NGP3 310 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 PEX13Q92968 403 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 TMEM125Q96AQ2 219 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 PKP4Q99569 1192 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 CHP1Q99653 195 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 SARGQ9BW04 601 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 TSSK1BQ9BXA7 367 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 INTUQ9ULD6 942 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 PPIEQ9UNP9 301 aaKnown RBP8.45□□□□□ -1.06
PRKCH-208ENST00000553846 SH2B3Q9UQQ2 575 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 CLDN16Q9Y5I7 305 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
PRKCH-208ENST00000553846 NCKAP5O14513 1909 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 KIAA1549Q9HCM3 1950 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 TCRBV16S1A1N1A0A5B0 115 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 FIGNL2A6NMB9 653 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 SMTNL1A8MU46 457 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 KLRC4-KLRK1H3BQV0 150 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 BCKDKO14874 412 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 CDC123O75794 336 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 STK10O94804 968 aaKnown RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 SERPINC1P01008 464 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 IL10P22301 178 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 PCSK6P29122 969 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 CTNNA1P35221 906 aaKnown RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 RPA3P35244 121 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 COILP38432 576 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 GRIA1P42261 906 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 GPR143P51810 404 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 PNLIPRP1P54315 467 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 OR4D2P58180 307 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 COPS2P61201 443 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 ABATP80404 500 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 FOXO1Q12778 655 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 TYSND1Q2T9J0 566 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 RIPPLY2Q5TAB7 128 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 SHEQ5VZ18 495 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 C11orf63Q6NUN7 778 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 TRILQ7L0X0 811 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 CYP4Z2PQ8N1L4 340 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 KCT2Q8NC54 265 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 NAXEQ8NCW5 288 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 PPFIBP2Q8ND30 876 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 GOT1L1Q8NHS2 421 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 MAGEC3Q8TD91 643 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 PEX11GQ96HA9 241 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 SMC6Q96SB8 1091 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 NAT10Q9H0A0 1025 aaKnown RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 DEFB127Q9H1M4 99 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 TREX1Q9NSU2 369 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 BEX4Q9NWD9 120 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 GALPQ9UBC7 116 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 EDARQ9UNE0 448 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 MED16Q9Y2X0 877 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 TCAF1Q9Y4C2 921 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 SLC22A7Q9Y694 548 aa8.44□□□□□ -1.06
PRKCH-208ENST00000553846 CHD3Q12873 2000 aaKnown RBP8.44□□□□□ -1.06
PRKCH-208ENST00000553846 RAI1Q7Z5J4 1906 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-208ENST00000553846 SVEP1Q4LDE5 3571 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 ZNF860A6NHJ4 632 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 H7BY64 318 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 SMAPO00193 183 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 AQP7O14520 342 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 KPNA5O15131 536 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 PRKNO60260 465 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-208ENST00000553846 ITGA10O75578 1167 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 CCNDBP1O95273 360 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 HRGP04196 525 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 FHP07954 510 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 CELA3AP09093 270 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 PEX19P40855 299 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 SKIV2L2P42285 1042 aaKnown RBP8.43□□□□□ -1.06
PRKCH-208ENST00000553846 TTPAP49638 278 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 KRTAP1-1Q07627 177 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 KCNJ11Q14654 390 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 HYAL4Q2M3T9 481 aa8.43□□□□□ -1.06
PRKCH-208ENST00000553846 ANKRD20A4Q4UJ75 823 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms