RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 NDUFA9Q16795 377 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 CCDC38Q502W7 563 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 NDUFAF5Q5TEU4 345 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 PDSS2Q86YH6 399 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 PLD3Q8IV08 490 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 TMEM156Q8N614 296 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 APCDD1LQ8NCL9 501 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 RERGQ96A58 199 aaPredicted RBP10.9□□□□□ -0.66
SNRPF-205ENST00000553192 MACROD1Q9BQ69 325 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 DEFB126Q9BYW3 111 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 EPB41L4BQ9H329 900 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 C6orf203Q9P0P8 240 aaPredicted RBP10.9□□□□□ -0.66
SNRPF-205ENST00000553192 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
SNRPF-205ENST00000553192 PCYOX1Q9UHG3 505 aa10.9□□□□□ -0.66
SNRPF-205ENST00000553192 ZNF223Q9UK11 482 aaPredicted RBP10.9□□□□□ -0.66
SNRPF-205ENST00000553192 RUVBL2Q9Y230 463 aaKnown RBP10.9□□□□□ -0.66
SNRPF-205ENST00000553192 ATP6AP2A0A1C7CYW4 349 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 SAGE2PA6NJ88 616 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 IQCF5A8MTL0 148 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 TXNDC9O14530 226 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 ATP6AP2O75787 350 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 OR56A5P0C7T3 313 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 PAX1P15863 534 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 FPR1P21462 350 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 TIMP3P35625 211 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 GEMP55040 296 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 KLHL30Q0D2K2 578 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 NAA25Q14CX7 972 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 HYAL4Q2M3T9 481 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 SUSD1Q6UWL2 747 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 VN1R4Q7Z5H5 301 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 VSIG1Q86XK7 387 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 RFX6Q8HWS3 928 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 SYN2Q92777 582 aaPredicted RBP10.89□□□□□ -0.67
SNRPF-205ENST00000553192 PEX11GQ96HA9 241 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 WDR83Q9BRX9 315 aaKnown RBP10.89□□□□□ -0.67
SNRPF-205ENST00000553192 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 MRPS30Q9NP92 439 aaKnown RBP10.89□□□□□ -0.67
SNRPF-205ENST00000553192 NLE1Q9NVX2 485 aaPredicted RBP10.89□□□□□ -0.67
SNRPF-205ENST00000553192 PCDHGB3Q9Y5G1 929 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 USF3Q68DE3 2245 aa10.89□□□□□ -0.67
SNRPF-205ENST00000553192 TRGV5A0A0B4J1U4 118 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 DEFB108AA8MXU0 73 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 HAT1O14929 419 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 RDH16O75452 317 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 EPPINO95925 133 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 EZRP15311 586 aaKnown RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ZFXP17010 805 aaPredicted RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 FOXN2P32314 431 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 RELAQ04206 551 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ACSF3Q4G176 576 aaPredicted RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ABHD13Q7L211 337 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 FBXW8Q8N3Y1 598 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 OR5T3Q8NGG3 340 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ROBO4Q8WZ75 1007 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ISL2Q96A47 359 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 VAT1Q99536 393 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 MAK16Q9BXY0 300 aaKnown RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 GBA3Q9H227 469 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 SEMA4BQ9NPR2 832 aaPredicted RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 TTC7AQ9ULT0 858 aaPredicted RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 EIF3LQ9Y262 564 aaKnown RBP10.88□□□□□ -0.67
SNRPF-205ENST00000553192 PCDHA3Q9Y5H8 950 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 ARHGAP21Q5T5U3 1957 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
SNRPF-205ENST00000553192 TRBV11-1A0A0K0K1C0 115 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 EEF1E1-BLOC1S5C9J1V9 151 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 EEF1E1O43324 174 aaKnown RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 PRKNO60260 465 aaPredicted RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 HCN1O60741 890 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 ANXA9O76027 345 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 ERGP11308 486 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 PKMP14618 531 aaKnown RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 CNR1P21554 472 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 PSMA3P25788 255 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 AOAHP28039 575 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 PRDX1Q06830 199 aaKnown RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 SLC10A1Q14973 349 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 XKR6Q5GH73 641 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 TTC23LQ6PF05 361 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 GK5Q6ZS86 529 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 CYP4X1Q8N118 509 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 KRT222Q8N1A0 295 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 MEIOBQ8N635 442 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 MCOLN3Q8TDD5 553 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 OR1F2PQ96R84 312 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 PIGQQ9BRB3 760 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 C10orf88Q9H8K7 445 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 LIN28AQ9H9Z2 209 aaKnown RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 ARNT2Q9HBZ2 717 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 ZNF701Q9NV72 531 aaPredicted RBP10.87□□□□□ -0.67
SNRPF-205ENST00000553192 SPATA7Q9P0W8 599 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 TAC3Q9UHF0 121 aa10.87□□□□□ -0.67
SNRPF-205ENST00000553192 ERVK-11Q9UQG0 969 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms