RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 MFSD3Q96ES6 412 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 CCDC120Q96HB5 630 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 KRT12Q99456 494 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 PKP4Q99569 1192 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 TRIM56Q9BRZ2 755 aaKnown RBP8.23□□□□□ -1.09
TMEM116-217ENST00000552801 TGIF2Q9GZN2 237 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 PCBD2Q9H0N5 130 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 CCDC177Q9NQR7 707 aaPredicted RBP8.23□□□□□ -1.09
TMEM116-217ENST00000552801 ENAMQ9NRM1 1142 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 TREX1Q9NSU2 369 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 INTS10Q9NVR2 710 aaKnown RBP8.23□□□□□ -1.09
TMEM116-217ENST00000552801 SYBUQ9NX95 663 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 ITGB1BP2Q9UKP3 347 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 NFU1Q9UMS0 254 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 SOX13Q9UN79 622 aa8.23□□□□□ -1.09
TMEM116-217ENST00000552801 A0A1W2PPV9 198 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 H7BY64 318 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SLC19A2O60779 497 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 PSIP1O75475 530 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 MED26O95402 600 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SLC16A8O95907 504 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CELA2AP08217 269 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CYC1P08574 325 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HIST1H2AGP0C0S8 130 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 FAM153BP0C7A2 387 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SLC35G6P0C7Q6 338 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TPSB2P20231 275 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HIST1H2ADP20671 130 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CA7P43166 264 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 XCR1P46094 333 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 VPS41P49754 854 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 RGS4P49798 205 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ADARP55265 1226 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 MAT1AQ00266 395 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 DHX34Q14147 1143 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 PCOLCEQ15113 449 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TPSAB1Q15661 275 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 MEP1AQ16819 746 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SYT16Q17RD7 645 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TYSND1Q2T9J0 566 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 FAM153CQ494X1 144 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ZNF470Q6ECI4 717 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 KIAA0930Q6ICG6 404 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 LRRC8EQ6NSJ5 796 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 BNC2Q6ZN30 1099 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 UBE2R2Q712K3 238 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ZC3H7AQ8IWR0 971 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SLC5A8Q8N695 610 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 AMER3Q8N944 861 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 OR9A4Q8NGU2 314 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ZCCHC10Q8TBK6 192 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CALML6Q8TD86 181 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CHTF18Q8WVB6 975 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ZNF669Q96BR6 464 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HIST1H2AHQ96KK5 128 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ATP6V1G3Q96LB4 118 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 PRAP1Q96NZ9 151 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TAAR6Q96RI8 345 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 LPAR4Q99677 370 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HIST1H2AJQ99878 128 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 H2AFJQ9BTM1 129 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 KIFC1Q9BW19 673 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TXLNGYQ9BZA5 131 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TMBIM4Q9HC24 238 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 KLHL1Q9NR64 748 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HCN3Q9P1Z3 774 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TRMT6Q9UJA5 497 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 COMMD10Q9Y6G5 202 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SPENQ96T58 3664 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CPAMD8Q8IZJ3 1885 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 POLEQ07864 2286 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 A0A087WUV0 522 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 LOC102723996A0A087X1L8 192 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 IGHV3-20A0A0C4DH32 117 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ESYT3A0FGR9 886 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 MAGEB16A2A368 324 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 HAT1O14929 419 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CEP104O60308 925 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 NSA2O95478 260 aaKnown RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 FGGP02679 453 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 STATHP02808 62 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 SERPIND1P05546 499 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 MPC1LP0DKB6 136 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 CCND1P24385 295 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TDGF1P3P51864 188 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 GNGT1P63211 74 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 PMP22Q01453 160 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 RELAQ04206 551 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 GPS1Q13098 491 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 OR1C1Q15619 314 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 TRIP13Q15645 432 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 NSDHLQ15738 373 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 UAP1Q16222 522 aaPredicted RBP8.22□□□□□ -1.09
TMEM116-217ENST00000552801 KRTCAP3Q53RY4 240 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 ACER2Q5QJU3 275 aa8.22□□□□□ -1.09
TMEM116-217ENST00000552801 AGBL2Q5U5Z8 902 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms