RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 OR8J2Q8NGG1 315 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 OR10G6Q8NH81 332 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.47
CACNB3-223ENST00000552480 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 NELL1Q92832 810 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 GFM2Q969S9 779 aaKnown RBP12.14□□□□□ -0.47
CACNB3-223ENST00000552480 RGMAQ96B86 450 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 ASB9Q96DX5 294 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 ITCHQ96J02 903 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 QRFPRQ96P65 431 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-223ENST00000552480 F2RL3Q96RI0 385 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 PRPF18Q99633 342 aaKnown RBP12.14□□□□□ -0.47
CACNB3-223ENST00000552480 CGREF1Q99674 301 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 KCNH6Q9H252 994 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 RNPEPL1Q9HAU8 725 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 FAM120CQ9NX05 1096 aaKnown RBP12.14□□□□□ -0.47
CACNB3-223ENST00000552480 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 ATP6V1HQ9UI12 483 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 ADAM29Q9UKF5 820 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 KLK4Q9Y5K2 254 aa12.14□□□□□ -0.47
CACNB3-223ENST00000552480 A0A096LPI6 279 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 A0A0J9YY10 115 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 A0A1B0GTW7 788 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 OR5K3A6NET4 321 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 PRORSD1PA6NEY8 169 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 LMO7DNF2Z398 122 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 YY2O15391 372 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 NOBOXO60393 691 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 FKBP6O75344 327 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ERN1O75460 977 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 PIAS2O75928 621 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 BCAS2O75934 225 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 KRT36O76013 467 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 KLK1P06870 262 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ANXA6P08133 673 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 HSD17B1P14061 328 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 TPP2P29144 1249 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 BSGP35613 385 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 FASLGP48023 281 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ARFIP1P53367 373 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 EEFSECP57772 596 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 CSTF1Q05048 431 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 FLOT2Q14254 428 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 OR4F3Q6IEY1 312 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 FAM71E1Q6IPT2 247 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 NANOGP8Q6NSW7 305 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 SPESP1Q6UW49 350 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 R3HCC1LQ7Z5L2 792 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 OOSP2Q86WS3 158 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 C17orf82Q86X59 251 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 NUDT13Q86X67 352 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 KIAA2013Q8IYS2 634 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 TMEM132CQ8N3T6 1108 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 RNF148Q8N7C7 305 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 OR8J3Q8NGG0 315 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 DNAJB14Q8TBM8 379 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 GAB3Q8WWW8 586 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 MTERF3Q96E29 417 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ZNF717Q9BY31 904 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 REEP4Q9H6H4 257 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 ERVMER34-1Q9H9K5 563 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 NANOGQ9H9S0 305 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 SLAMF8Q9P0V8 285 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 KLHL20Q9Y2M5 609 aa12.13□□□□□ -0.47
CACNB3-223ENST00000552480 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
CACNB3-223ENST00000552480 TRBV5-3A0A0A0MS03 114 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 LILRA5A6NI73 299 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 M0R296 226 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 ACOT8O14734 319 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 CAPN5O15484 640 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 DNAJA2O60884 412 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 KLHL18O94889 574 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 SERPIND1P05546 499 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 HOXB9P17482 250 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TCN1P20061 433 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 MAGP20916 626 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 CTSKP43235 329 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TRPC1P48995 793 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 DHPSP49366 369 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 WNT3P56703 355 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 MS4A2Q01362 244 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 RELAQ04206 551 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 HYAL2Q12891 473 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms