RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GFYI3L273 518 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TPOP07202 933 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 JAK1P23458 1154 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 IMPA1P29218 277 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 PTGER1P34995 402 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 PTGS2P35354 604 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 ART1P52961 327 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TBPL1P62380 186 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 MPP1Q00013 466 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 CDK16Q00536 496 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 CUL1Q13616 776 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 HERC3Q15034 1050 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 RPS6KA1Q15418 735 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 RNFT1Q5M7Z0 435 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 ARMC3Q5W041 872 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TMEM211Q6ICI0 200 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 NEPROQ6NW34 567 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 UBE2R2Q712K3 238 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 GSTA5Q7RTV2 222 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 PDSS2Q86YH6 399 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 FAM57AQ8TBR7 257 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC13A3Q8WWT9 602 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 KCNJ9Q92806 393 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TSLPQ969D9 159 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 TM4SF19Q96DZ7 209 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 HCFC1P51610 2035 aa13.32□□□□□ -0.28
CHMP1A-210ENST00000551981 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 KLRC4-KLRK1H3BQV0 150 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 FCHO1O14526 889 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 DIAPH2O60879 1101 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 FHP07954 510 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 CHRNB4P30926 498 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 HLCSP50747 726 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 MEF2AQ02078 507 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF468Q5VIY5 522 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF470Q6ECI4 717 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 CAPN13Q6MZZ7 669 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 NIPAL1Q6NVV3 410 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 CENPUQ71F23 418 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC26A11Q86WA9 606 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 C17orf64Q86WR6 236 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 SHISA5Q8N114 240 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 GIMAP7Q8NHV1 300 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 TBC1D20Q96BZ9 403 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 POM121Q96HA1 1249 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC30A3Q99726 388 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 LANCL2Q9NS86 450 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 KLF13Q9Y2Y9 288 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 NAV3Q8IVL0 2385 aa13.31□□□□□ -0.28
CHMP1A-210ENST00000551981 A0A1B0GTH9 108 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 FEZF1A0PJY2 475 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF860A6NHJ4 632 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 USP27XA6NNY8 438 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 PRMT3O60678 531 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 NADKO95544 446 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 IGFBP2P18065 325 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TPSB2P20231 275 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CCND1P24385 295 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TRHRP34981 398 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 MEOX1P50221 254 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 ITGA8P53708 1063 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 MLF1P58340 268 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 THOC5Q13769 683 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TPSAB1Q15661 275 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CCNG2Q16589 344 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CYP4X1Q8N118 509 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 KIF2BQ8N4N8 673 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CCDC138Q96M89 665 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 BAG1Q99933 345 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TP63Q9H3D4 680 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 SLC24A3Q9HC58 644 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 KCNJ16Q9NPI9 418 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 SAMD15Q9P1V8 674 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 TNFRSF10DQ9UBN6 386 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 DHRS7Q9Y394 339 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 COMMD10Q9Y6G5 202 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 CAPN6Q9Y6Q1 641 aa13.3□□□□□ -0.28
CHMP1A-210ENST00000551981 ANKHD1Q8IWZ3 2542 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 FAM90A27PA6NNH2 459 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 EIF3FO00303 357 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 NDUFS4O43181 175 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 CES4AQ5XG92 561 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 LRRC8EQ6NSJ5 796 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 CYHR1Q6ZMK1 362 aa13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 PIWIL4Q7Z3Z4 852 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-210ENST00000551981 TBC1D19Q8N5T2 526 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms