RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CCR8P51685 355 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CLCN2P51788 898 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CLDN2P57739 230 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CYP4F2P78329 520 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CSNK1G2P78368 415 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CTBSQ01459 385 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 MC1RQ01726 317 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 NFATC4Q14934 902 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 RBBP5Q15291 538 aaKnown RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 MPEG1Q2M385 716 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 NHSL2Q5HYW2 709 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 EOGTQ5NDL2 527 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 TPRG1LQ5T0D9 272 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 LPCAT2Q7L5N7 544 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 TRIM69Q86WT6 500 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 OR4K1Q8NGD4 311 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 OR2L8Q8NGY9 312 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 GOT1L1Q8NHS2 421 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ZFP90Q8TF47 636 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 OR1E3Q8WZA6 343 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 VPS50Q96JG6 964 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ZNF717Q9BY31 904 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ANKRD60Q9BZ19 345 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 XKR8Q9H6D3 395 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 MAGIXQ9H6Y5 334 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 MVB12BQ9H7P6 319 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ZNF696Q9H7X3 374 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 TPT1P8Q9HAU6 139 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 SH3BP4Q9P0V3 963 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ICKQ9UPZ9 632 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 CA5BQ9Y2D0 317 aa11.03□□□□□ -0.64
RAB5C-208ENST00000551338 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
RAB5C-208ENST00000551338 PRAMEF33A0A0G2JMD5 474 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 MYOCOSA0A1B0GUC4 107 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 FEZF1A0PJY2 475 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PDZK1P1A8MUH7 402 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 C10orf142B7Z368 130 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 H3BQ06 376 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PLPP1O14494 284 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PRICKLE3O43900 615 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 GPR37L1O60883 481 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 KCNK5O95279 499 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 SERPINA1P01009 418 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 IL3P08700 152 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 FAM58BPP0C7Q3 252 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 GABRG2P18507 467 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 CXCR2P25025 360 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PTX3P26022 381 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PEBP1P30086 187 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 SERPINB1P30740 379 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ACSL1P33121 698 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 BSGP35613 385 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 RPL3P39023 403 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 RAB28P51157 221 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TAS2R50P59544 299 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TFF2Q03403 129 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 VMACQ2NL98 169 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 UAP1L1Q3KQV9 507 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TMEM31Q5JXX7 168 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 DEPDC1Q5TB30 811 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 KHDRBS2Q5VWX1 349 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ERICH5Q6P6B1 374 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TBPL2Q6SJ96 375 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ISLR2Q6UXK2 745 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 R3HCC1LQ7Z5L2 792 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PGBD3Q8N328 593 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 SYNPOQ8N3V7 929 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 OR4A15Q8NGL6 344 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 OR2A1Q8NGT9 310 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 SNX19Q92543 992 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TFAP2CQ92754 450 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TMBIM1Q969X1 311 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PPCDCQ96CD2 204 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 MTERF3Q96E29 417 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PDXPQ96GD0 296 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PRPF18Q99633 342 aaKnown RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 BDH2Q9BUT1 245 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ADI1Q9BV57 179 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TRIM4Q9C037 500 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PITHD1Q9GZP4 211 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 CXorf56Q9H5V9 222 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 KCNK12Q9HB15 430 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 PRDM8Q9NQV8 689 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ZNF282Q9UDV7 671 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 MMP17Q9ULZ9 603 aa11.02□□□□□ -0.65
RAB5C-208ENST00000551338 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.02□□□□□ -0.65
RAB5C-208ENST00000551338 CEP192Q8TEP8 1941 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms