RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ZNF451Q9Y4E5 1061 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 C5orf51A6NDU8 294 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 MCIDASD6RGH6 385 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ITGA10O75578 1167 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CD2P06729 351 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 AVPR1BP47901 424 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CEBPGP53567 150 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CREB5Q02930 508 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 GALNT1Q10472 559 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 SLC36A3Q495N2 470 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 SPRYD7Q5W111 196 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 EIF5AL1Q6IS14 154 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 HAGHLQ6PII5 290 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 LILRB4Q8NHJ6 448 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 NEIL3Q8TAT5 605 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 KCNJ9Q92806 393 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 A0A1W2PRQ8 180 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 PI15O43692 258 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 RP2O75695 350 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 MATN4O95460 622 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CH25HO95992 272 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ALPPP05187 535 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 LCKP06239 509 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 KCNC4Q03721 635 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CDK5R2Q13319 367 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 QSOX2Q6ZRP7 698 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 SAMD12Q8N8I0 201 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 C7orf57Q8NEG2 295 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 FRS2Q8WU20 508 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 GMLQ99445 158 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 RHCGQ9UBD6 479 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 NLKQ9UBE8 527 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 P2RX2Q9UBL9 471 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ATPIF1Q9UII2 106 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 EXOSC1Q9Y3B2 195 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 MYH3P11055 1940 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 APOC3P02656 99 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 PRH1P02810 166 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ACADLP28330 430 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 GRM2Q14416 872 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 PTPRCAPQ14761 206 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CEACAM20Q6UY09 585 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 NOXA1Q86UR1 476 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 PAQR7Q86WK9 346 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CLDN19Q8N6F1 224 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 CUEDC1Q9NWM3 386 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 TAS2R10Q9NYW0 307 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 ZNF639Q9UID6 485 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 NENFQ9UMX5 172 aa15.31■□□□□ 0.04
RBFOX1-212ENST00000550418 LRRC14BA6NHZ5 514 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 XKRYO14609 159 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 TOXO94900 526 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 TGFB1P01137 390 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 SF1Q15637 639 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 PM20D2Q8IYS1 436 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 RPLP0P6Q8NHW5 317 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 CACNG4Q9UBN1 327 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 NUFIP1Q9UHK0 495 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 NUP98P52948 1817 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 C7orf72A4D263 438 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 C1QTNF3-AMACRE9PGA6 284 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 HCRTO43612 131 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 OR1F1O43749 312 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 MITFO75030 526 aaPredicted RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 RPL10P27635 214 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 DCKP27707 260 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 DNASE1L1P49184 302 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 SH3BP2P78314 561 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 RBBP4Q09028 425 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 FAAH2Q6GMR7 532 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 C22orf42Q6IC83 251 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 CARM1Q86X55 608 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 PHYKPLQ8IUZ5 450 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 ARMC10Q8N2F6 343 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 TRIM43Q96BQ3 446 aaPredicted RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 TSGA13Q96PP4 275 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 EMC3Q9P0I2 261 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 INTS6Q9UL03 887 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 HS3ST4Q9Y661 456 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 C2orf92A0A1B0GVN3 265 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 TBC1D3BA6NDS4 549 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 LRRN3E7EW58 273 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 LDOC1O95751 146 aaPredicted RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 PTCHD3Q3KNS1 767 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 AGAP6Q5VW22 663 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 SERPINA13PQ6UXR4 307 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 BTN2A1Q7KYR7 527 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 RGL4Q8IZJ4 473 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 BEND7Q8N7W2 519 aaPredicted RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 PAPD5Q8NDF8 572 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 OR6K6Q8NGW6 343 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 C12orf66Q96MD2 445 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 AGAP4Q96P64 663 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 CD244Q9BZW8 370 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 LRRN3Q9H3W5 708 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 GPSM3Q9Y4H4 160 aa15.3■□□□□ 0.04
RBFOX1-212ENST00000550418 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
RBFOX1-212ENST00000550418 FAM170BA6NMN3 283 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms