RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 STK16O75716 305 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 HPP00738 406 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 HEXBP07686 556 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 CYC1P08574 325 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 CXCR2P25025 360 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 HSPA7P48741 367 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 SOX8P57073 446 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 TLE1Q04724 770 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 DLG1Q12959 904 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 FLNCQ14315 2725 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 PDK4Q16654 411 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 FAM83EQ2M2I3 478 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 IRAK1BP1Q5VVH5 260 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 ATG9BQ674R7 924 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 ABHD13Q7L211 337 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 LRRC70Q7Z2Q7 622 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 ISCA2Q86U28 154 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 LAPTM4BQ86VI4 370 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 PDSS2Q86YH6 399 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 CPAMD8Q8IZJ3 1885 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 CENPLQ8N0S6 344 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 SNX31Q8N9S9 440 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 KCTD4Q8WVF5 259 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 MOCOSQ96EN8 888 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 PAFAH2Q99487 392 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 C5AR2Q9P296 337 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 MKL2Q9ULH7 1088 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 NFU1Q9UMS0 254 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 NAALAD2Q9Y3Q0 740 aa16.32■□□□□ 0.2
CHMP1A-208ENST00000550102 A0A087WUV0 522 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 CCDC189A1A4V9 331 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 SYCE1LA8MT33 242 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 MASP2O00187 686 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 CLGNO14967 610 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 H2AFYO75367 372 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 BMP10O95393 424 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ALDOAP04075 364 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 C2P06681 752 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 RHOXF2BP0C7M4 288 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF888P0CJ79 500 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 C1GALT1C1LP0DN25 315 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ALOX12P18054 663 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ITGA3P26006 1051 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 VARSP26640 1264 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 GSTM2P28161 218 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 XCR1P46094 333 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 SERPINB9P50453 376 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 CSRP3P50461 194 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 IRF9Q00978 393 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 SLBPQ14493 270 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 RBBP5Q15291 538 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 FBXO48Q5FWF7 155 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 MFSD4BQ5TF39 518 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 KLC3Q6P597 504 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 KRT78Q8N1N4 520 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 AFAP1L2Q8N4X5 818 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ANKRD53Q8N9V6 530 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 TTLQ8NG68 377 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 OR51Q1Q8NH59 317 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 UBTD2Q8WUN7 234 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 C8orf44Q96CB5 159 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 ATOH8Q96SQ7 321 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 PITHD1Q9GZP4 211 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 EHD1Q9H4M9 534 aa16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 PTBP2Q9UKA9 531 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-208ENST00000550102 RP1L1Q8IWN7 2480 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 A0A096LPK6 155 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 A0A1W2PQ72 361 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 URADA6NGE7 173 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF860A6NHJ4 632 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 UBXN8O00124 270 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 CCNT2O60583 730 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 GALR3O60755 368 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 TYK2P29597 1187 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 EEF1A2Q05639 463 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 MINDY4Q4G0A6 757 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 DEFB134Q4QY38 66 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 COLEC12Q5KU26 742 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 FAAH2Q6GMR7 532 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 TMIGD1Q6UXZ0 262 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 RHEBL1Q8TAI7 183 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 NXNL1Q96CM4 212 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 MESP1Q9BRJ9 268 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 SLC6A16Q9GZN6 736 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 VN1R1Q9GZP7 353 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF160Q9HCG1 818 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 RIC8BQ9NVN3 520 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 CNTRLQ7Z7A1 2325 aa16.3■□□□□ 0.2
CHMP1A-208ENST00000550102 NSG1A0A0A6YYJ2 146 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 PYCARD-AS1I3L0S3 204 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 KRT38O76015 456 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 KLHL2O95198 593 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 SERPINA6P08185 405 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 ABHD2P08910 425 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 C8orf89P0DMQ9 161 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 COX6A1P12074 109 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms