RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FBLP22087 321 aaKnown RBP18.39■□□□□ 0.53
DDX54-207ENST00000550016 ATP5F1P24539 256 aaPredicted RBP18.39■□□□□ 0.53
DDX54-207ENST00000550016 AVPR1BP47901 424 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 CYP4F2P78329 520 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 ZNF844Q08AG5 666 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 CDC20Q12834 499 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 DSG2Q14126 1118 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 ERV3-1Q14264 604 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 KRT71Q3SY84 523 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 CCDC153Q494R4 210 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 LIPJQ5W064 366 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.39■□□□□ 0.53
DDX54-207ENST00000550016 C4orf33Q8N1A6 199 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 UBE2E3Q969T4 207 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 SLC6A16Q9GZN6 736 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 SLC26A1Q9H2B4 701 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 RHBGQ9H310 441 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 WDR54Q9H977 334 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 ANKHQ9HCJ1 492 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 PCTPQ9UKL6 214 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 LHX6Q9UPM6 363 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 NUP210LQ5VU65 1888 aa18.39■□□□□ 0.53
DDX54-207ENST00000550016 URADA6NGE7 173 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 H0YIG0 161 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 UGDHO60701 494 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 CNOT3O75175 753 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 NSA2O95478 260 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 PROCP04070 461 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 RPS17P08708 135 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 PRKAR1AP10644 381 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 HNF4AP41235 474 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 HERVK_113P63132 956 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 SNRPNP63162 240 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 HERC3Q15034 1050 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 UGT8Q16880 541 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 GRHL2Q6ISB3 625 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 MED27Q6P2C8 311 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 SLC22A9Q8IVM8 553 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 SRRM1Q8IYB3 904 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 OR9A4Q8NGU2 314 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 OR2Y1Q8NGV0 311 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 ZCCHC10Q8TBK6 192 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 CATSPER2Q96P56 530 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 C1QTNF3Q9BXJ4 246 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 ERVK-6Q9BXR3 956 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 NOL11Q9H8H0 719 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 ACTR8Q9H981 624 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 PTRH2Q9Y3E5 179 aaKnown RBP18.38■□□□□ 0.53
DDX54-207ENST00000550016 MGAQ8IWI9 3026 aa18.38■□□□□ 0.53
DDX54-207ENST00000550016 PLIN3O60664 434 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 CLEC3AO75596 197 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 IL1RNP18510 177 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 FOLR3P41439 243 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 PRKAA2P54646 552 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 STXBP1P61764 594 aaKnown RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 OCA2Q04671 838 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 HYAL2Q12891 473 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 NKG7Q16617 165 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 BEND6Q5SZJ8 279 aaPredicted RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 FAM69BQ5VUD6 431 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 ABHD13Q7L211 337 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 PRSS41Q7RTY9 318 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 CROCCP2Q86T23 111 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 LAS2Q8IYD9 372 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 AFAP1L2Q8N4X5 818 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 AMER3Q8N944 861 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 L3MBTL4Q8NA19 623 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 ZNF483Q8TF39 744 aaPredicted RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 CCT6BQ92526 530 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 ATP6V1E2Q96A05 226 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 CCDC126Q96EE4 140 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 NSUN5Q96P11 429 aaKnown RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 ZIM3Q96PE6 472 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 NTMT1Q9BV86 223 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 KLHL31Q9H511 634 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 MKS1Q9NXB0 559 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 TRPC4Q9UBN4 977 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 CTSFQ9UBX1 484 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 ZNF282Q9UDV7 671 aaPredicted RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 NXT1Q9UKK6 140 aaKnown RBP18.37■□□□□ 0.53
DDX54-207ENST00000550016 MAP4K5Q9Y4K4 846 aa18.37■□□□□ 0.53
DDX54-207ENST00000550016 IGLV3-12A0A075B6K2 115 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 CDC14CA4D256 554 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 VSTM2BA6NLU5 285 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 G3V2L1 256 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 OR7A17O14581 309 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 RGS16O15492 202 aaPredicted RBP18.36■□□□□ 0.53
DDX54-207ENST00000550016 KLHL18O94889 574 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 FURINP09958 794 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 ZNF888P0CJ79 500 aaPredicted RBP18.36■□□□□ 0.53
DDX54-207ENST00000550016 MYL2P10916 166 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 ALOX12P18054 663 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 IMPDH1P20839 514 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 SERPINB1P30740 379 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 HPDP32754 393 aaPredicted RBP18.36■□□□□ 0.53
DDX54-207ENST00000550016 CCNG1P51959 295 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 SKP1P63208 163 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 RHDQ02161 417 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 IL10RAQ13651 578 aa18.36■□□□□ 0.53
DDX54-207ENST00000550016 SSPNQ14714 243 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms