RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ZDHHC11BP0C7U3 371 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ACPPP15309 386 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PRKCAP17252 672 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 DDOSTP39656 456 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 OR1E2P47887 323 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 HTRA3P83110 453 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 SLAMF1Q13291 335 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 DMC1Q14565 340 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 SSX1Q16384 188 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 TBRG1Q3YBR2 411 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 LGI4Q8N135 537 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 OR9Q2Q8NGE9 314 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 TM6SF2Q9BZW4 377 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 CHST8Q9H2A9 424 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PAQR5Q9NXK6 330 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 MTMR11A4FU01 709 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 PLK4O00444 970 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 TFECO14948 347 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 POU2F1P14859 743 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CASP9P55211 416 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 RHOAP61586 193 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 SPIBQ01892 262 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 SRSF11Q05519 484 aaKnown RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 DSC1Q08554 894 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 GAB1Q13480 694 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 EIF4HQ15056 248 aaKnown RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CHRNA6Q15825 494 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 EXOC3L2Q2M3D2 409 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 GGTA1PQ4G0N0 100 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ARMC4Q5T2S8 1044 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 MACC1Q6ZN28 852 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 SLC43A3Q8NBI5 491 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 DENND6BQ8NEG7 585 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CSGALNACT1Q8TDX6 532 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CRELD1Q96HD1 420 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 MCCC1Q96RQ3 725 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 TRAPPC4Q9Y296 219 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 POFUT2Q9Y2G5 429 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 GRIP1Q9Y3R0 1128 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 TBKBP1A7MCY6 615 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 H3BM21 787 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 TNFRSF10AO00220 468 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CLDN7O95471 211 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 HLA-EP13747 358 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ITPKAP23677 461 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 BAK1Q16611 211 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 PTCHD3Q3KNS1 767 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 RSPO2Q6UXX9 243 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 LRRC70Q7Z2Q7 622 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 DEPDC4Q8N2C3 294 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 EXOSC4Q9NPD3 245 aaKnown RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 FAM120CQ9NX05 1096 aaKnown RBP13.22□□□□□ -0.29
HDAC7-228ENST00000548938 DNMT3LQ9UJW3 386 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 V9GYH0 126 aa13.22□□□□□ -0.29
HDAC7-228ENST00000548938 TRBV5-4A0A0C4DH59 114 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 CCRL2O00421 344 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 BPIP17213 487 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 TIE1P35590 1138 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 DUSP4Q13115 394 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 TAB1Q15750 504 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 CYP27C1Q4G0S4 372 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 GLB1LQ6UWU2 654 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 UBE2R2Q712K3 238 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 OR4C15Q8NGM1 316 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 SKA2Q8WVK7 121 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 ASB15Q8WXK1 588 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 CNPPD1Q9BV87 410 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 DYRK4Q9NR20 520 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 GKN1Q9NS71 199 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 CRNNQ9UBG3 495 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-228ENST00000548938 A0A075B6Q4 140 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 GLYATL1P3A0A0U1RQE8 302 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 K7ERQ8 282 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 PCDH7O60245 1069 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 FKTNO75072 461 aa13.21□□□□□ -0.29
HDAC7-228ENST00000548938 IRF1P10914 325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms