RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 HSPA7P48741 367 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 IRF9Q00978 393 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 RGS1Q08116 209 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 PCDH1Q08174 1060 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 RBBP7Q16576 425 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 PDK4Q16654 411 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 SHISA6Q6ZSJ9 500 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 PDSS2Q86YH6 399 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 HPS6Q86YV9 775 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 ZC3H7AQ8IWR0 971 aaKnown RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 CLEC1AQ8NC01 280 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 TRPV3Q8NET8 790 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 TTLQ8NG68 377 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 OR9A4Q8NGU2 314 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 MOCOSQ96EN8 888 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 CD244Q9BZW8 370 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 SLC6A16Q9GZN6 736 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 NT5DC2Q9H857 520 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 CLK4Q9HAZ1 481 aaKnown RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 ANKHQ9HCJ1 492 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 ZNF71Q9NQZ8 489 aaPredicted RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 FETUBQ9UGM5 382 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 ANAPC2Q9UJX6 822 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
YBX3-217ENST00000546164 CCDC88CQ9P219 2028 aa11.25□□□□□ -0.61
YBX3-217ENST00000546164 BAHCC1Q9P281 2608 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 NBASA2RRP1 2371 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 IDSB3KWA1 339 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 UBXN8O00124 270 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 MAP2K7O14733 419 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 KLHL41O60662 606 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 GALR3O60755 368 aaPredicted RBP11.24□□□□□ -0.61
YBX3-217ENST00000546164 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 H2AFYO75367 372 aaKnown RBP11.24□□□□□ -0.61
YBX3-217ENST00000546164 KLHL18O94889 574 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 BMP10O95393 424 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 PDGFAP04085 211 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 SERPINA6P08185 405 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 FAM153BP0C7A2 387 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 COL6A2P12110 1019 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 ALOX12P18054 663 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 IL1RNP18510 177 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 IL10P22301 178 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 TNFRSF8P28908 595 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 CASP2P42575 452 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 PGDP52209 483 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 SKP1P63208 163 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 MAT1AQ00266 395 aaKnown RBP11.24□□□□□ -0.61
YBX3-217ENST00000546164 HYAL2Q12891 473 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
YBX3-217ENST00000546164 MYBPC3Q14896 1274 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 TBCCQ15814 346 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 FAM153CQ494X1 144 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 KLC3Q6P597 504 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 ASB18Q6ZVZ8 466 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 PRSS41Q7RTY9 318 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 KRT78Q8N1N4 520 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 FDCSPQ8NFU4 85 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 OR11G2Q8NGC1 345 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 ZCCHC10Q8TBK6 192 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 CREB3L4Q8TEY5 395 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.61
YBX3-217ENST00000546164 ESAMQ96AP7 390 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 SMAD5Q99717 465 aaKnown RBP11.24□□□□□ -0.61
YBX3-217ENST00000546164 EFCAB11Q9BUY7 163 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 ATP13A2Q9NQ11 1180 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 GPR83Q9NYM4 423 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 FBXL4Q9UKA2 621 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 ASB1Q9Y576 335 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 HEMK1Q9Y5R4 338 aaPredicted RBP11.24□□□□□ -0.61
YBX3-217ENST00000546164 MYO18BQ8IUG5 2567 aa11.24□□□□□ -0.61
YBX3-217ENST00000546164 LOC102723996A0A087X1L8 192 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 URADA6NGE7 173 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 SUPT3HB4E1H0 165 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 POC1B-GALNT4F8VUJ3 575 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 K7EPI3 171 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 SGK494L7N484 410 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 FFAR3O14843 346 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 CLGNO14967 610 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 GPR42O15529 346 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 ZNF500O60304 480 aaPredicted RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 SUPT3HO75486 399 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 WFS1O76024 890 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
YBX3-217ENST00000546164 SMIM10L1P0DMW3 83 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 PLA2G2AP14555 144 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 ACPPP15309 386 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 NR1D1P20393 614 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 GCAP28676 217 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 EMP2P54851 167 aa11.23□□□□□ -0.61
YBX3-217ENST00000546164 KLRB1Q12918 225 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms