RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PPP6CO00743 305 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 CLDN9O95484 217 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 ONECUT2O95948 504 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 CAPN1P07384 714 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 SERPINA6P08185 405 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 TSPAN8P19075 237 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 TCN2P20062 427 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 AGXTP21549 392 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 ETV4P43268 484 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 TLE3Q04726 772 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 RGS1Q08116 209 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 HYAL2Q12891 473 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 SRSF6Q13247 344 aaKnown RBP19.48■□□□□ 0.71
HMGA2-211ENST00000545998 FAM53BQ14153 422 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 RBBP7Q16576 425 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 NDUFA9Q16795 377 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 NKAIN1Q4KMZ8 207 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 LIPMQ5VYY2 423 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 ADNP2Q6IQ32 1131 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 MED27Q6P2C8 311 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 FAM198BQ6UWH4 519 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 C10orf107Q8IVU9 208 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 PPP4R1Q8TF05 950 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 TLCD1Q96CP7 247 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 MVB12AQ96EY5 273 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 SLC6A16Q9GZN6 736 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 GSTO2Q9H4Y5 243 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 SLC22A11Q9NSA0 550 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 WDR70Q9NW82 654 aa19.48■□□□□ 0.71
HMGA2-211ENST00000545998 UQCRHLA0A096LP55 91 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 A0A1B0GTL3 188 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 ANKDD1BA6NHY2 528 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 PRPF4O43172 522 aaKnown RBP eCLIP19.47■□□□□ 0.71
HMGA2-211ENST00000545998 FOXS1O43638 330 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 CLEC3AO75596 197 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 OTCP00480 354 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 UQCRHP07919 91 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 LIFP15018 202 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 F8A1P23610 371 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 DLSTP36957 453 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 NAGLUP54802 743 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 PRMT9Q6P2P2 845 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 MYLK4Q86YV6 388 aaPredicted RBP19.47■□□□□ 0.71
HMGA2-211ENST00000545998 METTL27Q8N6F8 245 aaPredicted RBP19.47■□□□□ 0.71
HMGA2-211ENST00000545998 OR7G3Q8NG95 312 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 TRPC4APQ8TEL6 797 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 CCNL2Q96S94 520 aaPredicted RBP19.47■□□□□ 0.71
HMGA2-211ENST00000545998 AICDAQ9GZX7 198 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 DRC3Q9H069 523 aa19.47■□□□□ 0.71
HMGA2-211ENST00000545998 C21orf140B9A014 251 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 H0YIV9 168 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 TBX6O95947 436 aaPredicted RBP19.46■□□□□ 0.71
HMGA2-211ENST00000545998 ITPKBP27987 946 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 ARL1P40616 181 aaPredicted RBP19.46■□□□□ 0.71
HMGA2-211ENST00000545998 GGTA1PQ4G0N0 100 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 PRSS41Q7RTY9 318 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 MILR1Q7Z6M3 343 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 AFAP1L2Q8N4X5 818 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 CCNYL1Q8N7R7 359 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 OR4F6Q8NGB9 312 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 ZCCHC10Q8TBK6 192 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.46■□□□□ 0.71
HMGA2-211ENST00000545998 KIAA1143Q96AT1 154 aaPredicted RBP19.46■□□□□ 0.71
HMGA2-211ENST00000545998 GPN2Q9H9Y4 310 aaPredicted RBP19.46■□□□□ 0.71
HMGA2-211ENST00000545998 ZNF225Q9UK10 706 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 TSC22D4Q9Y3Q8 395 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 PCDHGA6Q9Y5G7 932 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 PCDHGA11Q9Y5H2 935 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 SLC22A7Q9Y694 548 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 NBEAQ8NFP9 2946 aa19.46■□□□□ 0.71
HMGA2-211ENST00000545998 EFSO43281 561 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 MLYCDO95822 493 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 RAB40ALP0C0E4 278 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 ALDH3A1P30838 453 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 OR1D4P47884 311 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 NAA20P61599 178 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 DNASE1L3Q13609 305 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 MPP2Q14168 576 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 CPSF6Q16630 551 aaKnown RBP eCLIP19.45■□□□□ 0.7
HMGA2-211ENST00000545998 ST3GAL2Q16842 350 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 LETMD1Q6P1Q0 360 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 FRMD7Q6ZUT3 714 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 COX15Q7KZN9 410 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 ZNF473Q8WTR7 871 aaKnown RBP19.45■□□□□ 0.7
HMGA2-211ENST00000545998 ZNF382Q96SR6 550 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 C17orf62Q9BQA9 187 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 MECRQ9BV79 373 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 KLHL31Q9H511 634 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 ZNF304Q9HCX3 659 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 IFT80Q9P2H3 777 aaPredicted RBP19.45■□□□□ 0.7
HMGA2-211ENST00000545998 IL17BQ9UHF5 180 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 CDC14AQ9UNH5 594 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 MAU2Q9Y6X3 613 aa19.45■□□□□ 0.7
HMGA2-211ENST00000545998 A0A0A6YYC8 382 aaPredicted RBP19.44■□□□□ 0.7
HMGA2-211ENST00000545998 LRIT2A6NDA9 550 aa19.44■□□□□ 0.7
HMGA2-211ENST00000545998 I3L1I5 382 aaPredicted RBP19.44■□□□□ 0.7
HMGA2-211ENST00000545998 TM9SF1O15321 606 aa19.44■□□□□ 0.7
HMGA2-211ENST00000545998 PCNAP12004 261 aa19.44■□□□□ 0.7
HMGA2-211ENST00000545998 WT1P19544 449 aaPredicted RBP19.44■□□□□ 0.7
HMGA2-211ENST00000545998 SERPINB1P30740 379 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms