RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 COPZ1P61923 177 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ACSM2AQ08AH3 577 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RBBP4Q09028 425 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CHIT1Q13231 466 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 STARD3Q14849 445 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RTP2Q5QGT7 225 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ZDHHC20Q5W0Z9 365 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ACSM2BQ68CK6 577 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 Q6ZPB1 254 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 TSEN54Q7Z6J9 526 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 UBQLNLQ8IYU4 475 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 LGI4Q8N135 537 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CLIP4Q8N3C7 705 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 C2orf69Q8N8R5 385 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 LILRB4Q8NHJ6 448 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 WDR20Q8TBZ3 569 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 SPPL2AQ8TCT8 520 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 SH3KBP1Q96B97 665 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ALG14Q96F25 216 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 Q96MT0 163 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TRNT1Q96Q11 434 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 MAPKAP1Q9BPZ7 522 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RMI1Q9H9A7 625 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ZNF556Q9HAH1 456 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 DYRK4Q9NR20 520 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TRMT13Q9NUP7 481 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 QPCTLQ9NXS2 382 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TRPM5Q9NZQ8 1165 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 DUSP12Q9UNI6 340 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 DOCK6Q96HP0 2047 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TBKBP1A7MCY6 615 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 A8MU76 341 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CENPBD1B2RD01 187 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 KPNA5O15131 536 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 KIAA0513O60268 411 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 PRAMEF4O60810 478 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 SLITRK5O94991 958 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 IGSF6O95976 241 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 LAMP1P11279 417 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CSKP41240 450 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 HTR3AP46098 478 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 IDH2P48735 452 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 OR2B6P58173 313 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CDC42P60953 191 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 SPIBQ01892 262 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 FCHO2Q0JRZ9 810 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 KCNA10Q16322 511 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CARTPTQ16568 116 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CPTPQ5TA50 214 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 PRAMEF9Q5VWM5 478 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TMC5Q6UXY8 1006 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 GDPGP1Q6ZNW5 385 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RNF130Q86XS8 419 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 RASGRP3Q8IV61 690 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 B3GNT7Q8NFL0 401 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 COQ8BQ96D53 544 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 CEP19Q96LK0 163 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 SDHCQ99643 169 aaPredicted RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 CCM2Q9BSQ5 444 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TM6SF2Q9BZW4 377 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 ELAC1Q9H777 363 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 SMURF1Q9HCE7 757 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 GKN1Q9NS71 199 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 AFF4Q9UHB7 1163 aaKnown RBP8.43□□□□□ -1.06
TDP1-204ENST00000545686 SLC22A14Q9Y267 594 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 TMEM98Q9Y2Y6 226 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 PCDHGB2Q9Y5G2 931 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 THSD7BQ9C0I4 1608 aa8.43□□□□□ -1.06
TDP1-204ENST00000545686 H0YIV9 168 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 YY2O15391 372 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 KRT75O95678 551 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 SRPRAP08240 638 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 NUDT7P0C024 238 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 IRF1P10914 325 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CKBP12277 381 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 HMGA1P17096 107 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 ENDOUP21128 410 aaKnown RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 SERPINA4P29622 427 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 DDOSTP39656 456 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 HNF4AP41235 474 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 NKX2-5P52952 324 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 NUDT6P53370 316 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 B4GALNT1Q00973 533 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 IRF8Q02556 426 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 GAB1Q13480 694 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 GPR50Q13585 617 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CDH18Q13634 790 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CLPPQ16740 277 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 LRRC26Q2I0M4 334 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 CCSAPQ6IQ19 270 aaPredicted RBP8.42□□□□□ -1.06
TDP1-204ENST00000545686 GRHL2Q6ISB3 625 aa8.42□□□□□ -1.06
TDP1-204ENST00000545686 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms