RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 A0A087WUV0 522 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LOC105369274A0A096LPK9 316 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LOC102723532A0A0G2JNH3 316 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CCDC151A5D8V7 595 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 IDSB3KWA1 339 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SMIM24O75264 130 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ALOX12BO75342 701 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TSPAN12O95859 305 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CAPN1P07384 714 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 C1GALT1C1LP0DN25 315 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 COL6A2P12110 1019 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 RNH1P13489 461 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 GFAPP14136 432 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 EPB42P16452 691 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ALOX12P18054 663 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TAC1P20366 129 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 GABRB3P28472 473 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SSTR1P30872 391 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TLX1P31314 330 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 BCL6P41182 706 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 XCR1P46094 333 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SERPINB8P50452 374 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NAA20P61599 178 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CSNK1G2P78368 415 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ARG2P78540 354 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NFKB2Q00653 900 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 KLC1Q07866 573 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 EFTUD2Q15029 972 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TLR1Q15399 786 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TGFBIQ15582 683 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TSNQ15631 228 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 INAQ16352 499 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 PDK4Q16654 411 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ABHD17BQ5VST6 288 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ATG9BQ674R7 924 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 B3GNTL1Q67FW5 361 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TRIM40Q6P9F5 258 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TRMT10BQ6PF06 316 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NXPE4Q6UWF7 544 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 IGFL3Q6UXB1 125 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ISLR2Q6UXK2 745 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TMIGD1Q6UXZ0 262 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TRMT10CQ7L0Y3 403 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LRRC70Q7Z2Q7 622 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LCA5Q86VQ0 697 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 PTRH1Q86Y79 214 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 FAM20CQ8IXL6 584 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 OR4N4Q8N0Y3 316 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 AGGF1Q8N302 714 aaeCLIP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 EIF1ADQ8N9N8 165 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 GALNT11Q8NCW6 608 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 OR4K1Q8NGD4 311 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 DNAJB14Q8TBM8 379 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NT5CQ8TCD5 201 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CPT1CQ8TCG5 803 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 FBF1Q8TES7 1133 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 PPP4R1Q8TF05 950 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CCT6BQ92526 530 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ATP6V1E2Q96A05 226 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 TBC1D20Q96BZ9 403 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 THOC3Q96J01 351 aaKnown RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LPAR4Q99677 370 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 WDR77Q9BQA1 342 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NPLQ9BXD5 320 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NT5DC2Q9H857 520 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 AKIRIN1Q9H9L7 192 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 LRRC4CQ9HCJ2 640 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 MLXIPLQ9NP71 852 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC6A20Q9NP91 592 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NMRK1Q9NWW6 199 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 MS4A12Q9NXJ0 267 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NUDT4Q9NZJ9 180 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 OPTCQ9UBM4 332 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 PLEKHB1Q9UF11 243 aaPredicted RBP5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 ADAMTS6Q9UKP5 1117 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 NFU1Q9UMS0 254 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 SLC22A14Q9Y267 594 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CNTRLQ7Z7A1 2325 aa5.32□□□□□ -1.56
CLSTN3-215ENST00000544584 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 ABCA2Q9BZC7 2435 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 A0A0A6YYC8 382 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 TRAV17A0A0B4J275 112 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 IGKV1-8A0A0C4DH67 115 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 IQANK1A0A1B0GTG1 560 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FEZF1A0PJY2 475 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NCF1BA6NI72 391 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 NCF1CA8MVU1 366 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 SUPT3HB4E1H0 165 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 I3L1I5 382 aaPredicted RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CDC7O00311 574 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 FCHO1O14526 889 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 B3GALT2O43825 422 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 CCNT2O60583 730 aaKnown RBP5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 PRMT3O60678 531 aa5.31□□□□□ -1.56
CLSTN3-215ENST00000544584 UGDHO60701 494 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms