RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OR8D2Q9GZM6 311 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 PIGUQ9H490 435 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 LRP6O75581 1613 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ADH1BP00325 375 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 DNAJB1P25685 340 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ARRB1P49407 418 aaPredicted RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF252P-AS1Q0IIN9 211 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 MEP1AQ16819 746 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 FBXO42Q6P3S6 717 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 UCK2Q9BZX2 261 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 KLRF1Q9NZS2 232 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF221Q9UK13 617 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 FKBP7Q9Y680 259 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 HEPACAM2A8MVW5 462 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 PDYNP01213 254 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ACRV1P26436 265 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 PDCD4Q53EL6 469 aaKnown RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 FCGR1BQ92637 280 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 C1orf21Q9H246 121 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SP140LQ9H930 580 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ANKRA2Q9H9E1 313 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF879B4DU55 563 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 AGR2O95994 175 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 CLUP10909 449 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 OR12D2P58182 307 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 CSTF1Q05048 431 aaKnown RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 ODF4Q2M2E3 257 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 ZNF542PQ5EBM4 170 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 NANOGP8Q6NSW7 305 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 TMEM156Q8N614 296 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 DOK4Q8TEW6 326 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 NANOGQ9H9S0 305 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 TNFRSF10DQ9UBN6 386 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 TBC1D24Q9ULP9 559 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 MYH10P35580 1976 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 BHMG1C9JSJ3 638 aaPredicted RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 BLOC1S5-TXNDC5H3BN57 136 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SDHDO14521 159 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SLC6A9P48067 706 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 MLLT1Q03111 559 aaPredicted RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 CWF19L1Q69YN2 538 aaKnown RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 TMPRSS9Q7Z410 1059 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 GALNT10Q86SR1 603 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 SETD7Q8WTS6 366 aaKnown RBP12.38□□□□□ -0.43
CHD4-211ENST00000544484 HERC2P3Q9BVR0 1158 aa12.38□□□□□ -0.43
CHD4-211ENST00000544484 BCAS2O75934 225 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 LDOC1O95751 146 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 NTHL1P78549 312 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ZNF267Q14586 743 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 SFT2D3Q587I9 215 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ERMP1Q7Z2K6 904 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SHDQ96IW2 340 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ZNF382Q96SR6 550 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 IFT46Q9NQC8 304 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SERINC1Q9NRX5 453 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SLC35F4A4IF30 521 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 CHAF1BQ13112 559 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SLC35F1Q5T1Q4 408 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 OTUB2Q96DC9 234 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 TMED9Q9BVK6 235 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 PTTG2Q9NZH5 202 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SMIM30A4D0T7 59 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 COQ9O75208 318 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 PLGP00747 810 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 FPR1P21462 350 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 RORCP51449 518 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 VSX2P58304 361 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 SLC3A1Q07837 685 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 UNC50Q53HI1 259 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 RBM48Q5RL73 367 aaKnown RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 MARCH9Q86YJ5 346 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 DNAJA3Q96EY1 480 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 TTTY10Q9BZA0 68 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 POPDC3Q9HBV1 291 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 FZD3Q9NPG1 666 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 PCDHGB7Q9Y5F8 929 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms