RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CHRNA6Q15825 494 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 MOGQ16653 247 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 GDF6Q6KF10 455 aaPredicted RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 TCEANCQ8N8B7 351 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 OR5T1Q8NG75 326 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 RPF2Q9H7B2 306 aaKnown RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 RPH3AQ9Y2J0 694 aaPredicted RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 CLCA1A8K7I4 914 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 M0R129 80 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 PROM1O43490 865 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 SLC36A4Q6YBV0 504 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 ZNF709Q8N972 641 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 PHOX2BQ99453 314 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 MAPKAP1Q9BPZ7 522 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 RGCCQ9H4X1 137 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 SLC32A1Q9H598 525 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 KCNS2Q9ULS6 477 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 E9PCH4 1651 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 FLT3LGP49771 235 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 SYPL2Q5VXT5 272 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 FRG2Q64ET8 278 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 PHOSPHO1Q8TCT1 267 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 FRG2BQ96QU4 278 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 CD180Q99467 661 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 OR2S2Q9NQN1 319 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 EXTL2Q9UBQ6 330 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 AJAP1Q9UKB5 411 aaPredicted RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 LRRC42Q9Y546 428 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 PCDHB14Q9Y5E9 798 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 HSD3B1P14060 373 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 VIPR1P32241 457 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 RPS24P62847 133 aaKnown RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 PACRGLQ8N7B6 248 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 CNIH3Q8TBE1 160 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 TMEM68Q96MH6 324 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 USP29Q9HBJ7 922 aa14.99□□□□□ -0.01
CHD4-210ENST00000544040 MRPL15Q9P015 296 aaKnown RBP14.99□□□□□ -0.01
CHD4-210ENST00000544040 ENTPD1P49961 510 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 NFE2L1Q14494 772 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 PDGFRLQ15198 375 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 LYSMD3Q7Z3D4 306 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ZC3H13Q5T200 1668 aaKnown RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 B4GALT2O60909 372 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 LYPLA2O95372 231 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 GTF2F2P13984 249 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 EDNRBP24530 442 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 TUBA3CQ13748 450 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 NCBP2-AS2Q69YL0 99 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 SMYD5Q6GMV2 418 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 DNM1P34Q6PK57 102 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ADGRD2Q7Z7M1 963 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 RNF130Q86XS8 419 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 SAMD12Q8N8I0 201 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ZNF717Q9BY31 904 aaPredicted RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 IFT52Q9Y366 437 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 OTOL1A6NHN0 477 aaPredicted RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 LRRN3E7EW58 273 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 SLITRK5O94991 958 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 FARS2O95363 451 aaKnown RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 SLC26A5P58743 744 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 MVKQ03426 396 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 RAB39AQ14964 217 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 TMIEQ8NEW7 156 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 FANK1Q8TC84 345 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 YTHDF1Q9BYJ9 559 aaKnown RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 LRRN3Q9H3W5 708 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 FZD3Q9NPG1 666 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ATPIF1Q9UII2 106 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 CCDC163A0A0D9SF12 145 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 A0A1B0GVI7 797 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 DLX3O60479 287 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 IL1R2P27930 398 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 RAB15P59190 212 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ID2Q02363 134 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 GAD2Q05329 585 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 TIGD4Q8IY51 512 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ISOC1Q96CN7 298 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ASPNQ9BXN1 380 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 WDR26Q9H7D7 661 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ZIM2Q9NZV7 527 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 WASF3Q9UPY6 502 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 WNT9AO14904 365 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ABCB7O75027 752 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 PTPN2P17706 415 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 RPS13P62277 151 aaKnown RBP14.98□□□□□ -0.01
CHD4-210ENST00000544040 FOXR2Q6PJQ5 311 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 C15orf40Q8WUR7 153 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 MSLNLQ96KJ4 702 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 PSKH2Q96QS6 385 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 SDHAF3Q9NRP4 125 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 ZDHHC3Q9NYG2 299 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 SCP2D1Q9UJQ7 156 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 PCDHGB2Q9Y5G2 931 aa14.98□□□□□ -0.01
CHD4-210ENST00000544040 AGLP35573 1532 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 MANBAO00462 879 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 FOXD2O60548 495 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms