RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 ERVK-8P63133 956 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 IRX1P78414 480 aaPredicted RBP15.24■□□□□ 0.03
XRCC1-202ENST00000543982 EMX2Q04743 252 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 CYLC2Q14093 348 aaPredicted RBP15.24■□□□□ 0.03
XRCC1-202ENST00000543982 HERC3Q15034 1050 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 FUNDC1Q8IVP5 155 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 C10orf67Q8IYJ2 551 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 C1orf52Q8N6N3 182 aaKnown RBP15.24■□□□□ 0.03
XRCC1-202ENST00000543982 FBXO27Q8NI29 283 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 CMTM7Q96FZ5 175 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 EGLN2Q96KS0 407 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 EBPLQ9BY08 206 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 MS4A8Q9BY19 250 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 ZNF717Q9BY31 904 aaPredicted RBP15.24■□□□□ 0.03
XRCC1-202ENST00000543982 CADM1Q9BY67 442 aaKnown RBP15.24■□□□□ 0.03
XRCC1-202ENST00000543982 SEMA6CQ9H3T2 930 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 BRF2Q9HAW0 419 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 AIG1Q9NVV5 245 aa15.24■□□□□ 0.03
XRCC1-202ENST00000543982 A0A0G2JN53 185 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 ANKDD1BA6NHY2 528 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 NPIPB8E9PQR5 432 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 CDH3P22223 829 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 PRPH2P23942 346 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 CXCR2P25025 360 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 ZFP36L2P47974 494 aaKnown RBP15.23■□□□□ 0.03
XRCC1-202ENST00000543982 PPM1FP49593 454 aaPredicted RBP15.23■□□□□ 0.03
XRCC1-202ENST00000543982 UFM1P61960 85 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 MXRA7P84157 204 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 DEFB110Q30KQ9 67 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 SPATA19Q7Z5L4 167 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 CLHC1Q8NHS4 586 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 UBE2E3Q969T4 207 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 ZUFSPQ96AP4 578 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 REPS1Q96D71 796 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 PPP3R2Q96LZ3 170 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 SEMA4GQ9NTN9 838 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 EPHA6Q9UF33 1036 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 AP1M2Q9Y6Q5 423 aa15.23■□□□□ 0.03
XRCC1-202ENST00000543982 PSMD12O00232 456 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ANKRD28O15084 1053 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 GDF9O60383 454 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 RASSF9O75901 435 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 CKMT1AP12532 417 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 BCKDHAP12694 445 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 HRH2P25021 359 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 CPOXP36551 454 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ACADVLP49748 655 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 STX1BP61266 288 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 PTGR1Q14914 329 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 GSTA3Q16772 222 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 DNAL1Q4LDG9 190 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 SNAP47Q5SQN1 464 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 DEPDC1Q5TB30 811 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 KLHL35Q6PF15 583 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 SNX32Q86XE0 403 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 KCT2Q8NC54 265 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 CCDC3Q9BQI4 270 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 RTKNQ9BST9 563 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 PRM3Q9NNZ6 103 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 STARD5Q9NSY2 213 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 LRIT2A6NDA9 550 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 H0YGG7 62 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 PLPP1O14494 284 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 EEDO75530 441 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 C9P02748 559 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ZNF883P0CG24 379 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 HSD3B1P14060 373 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 IDO1P14902 403 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 HSD3B2P26439 372 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ELF3P78545 371 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 ZNF33BQ06732 778 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 KCNAB1Q14722 419 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 KHDRBS2Q5VWX1 349 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 NOXRED1Q6NXP6 359 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 CYP20A1Q6UW02 462 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 GK5Q6ZS86 529 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 LIX1Q8N485 282 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 KRTCAP2Q8N6L1 136 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 C19orf47Q8N9M1 422 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 IFI44Q8TCB0 444 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 MCUR1Q96AQ8 359 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 TM4SF19Q96DZ7 209 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 AHCYL2Q96HN2 611 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 FCRL1Q96LA6 429 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 PHOX2BQ99453 314 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 PITHD1Q9GZP4 211 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 RAB33BQ9H082 229 aa15.22■□□□□ 0.03
XRCC1-202ENST00000543982 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 MRPS2Q9Y399 296 aaKnown RBP15.22■□□□□ 0.03
XRCC1-202ENST00000543982 A8MU76 341 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 AGRPO00253 132 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 SDC1P18827 310 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 PTX3P26022 381 aaPredicted RBP15.21■□□□□ 0.03
XRCC1-202ENST00000543982 GABRA4P48169 554 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 MAPRE2Q15555 327 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 HKDC1Q2TB90 917 aa15.21■□□□□ 0.03
XRCC1-202ENST00000543982 RNF44Q7L0R7 432 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms