RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 AHSPQ9NZD4 102 aa11.36□□□□□ -0.59
DDB1-223ENST00000543658 PILRAQ9UKJ1 303 aa11.36□□□□□ -0.59
DDB1-223ENST00000543658 RARRES3Q9UL19 164 aa11.36□□□□□ -0.59
DDB1-223ENST00000543658 CCDC187A0A096LP49 1063 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 A0A0G2JND7 137 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 TM4SF5O14894 197 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 DIAPH2O60879 1101 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 SH3BGRLO75368 114 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 OR2B3O76000 313 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 MYO1DO94832 1006 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 STATHP02808 62 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 SERPINA6P08185 405 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 MSL3P1P0C860 447 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 FOLR1P15328 257 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 SEC24CP53992 1094 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 AQP5P55064 265 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 BTKQ06187 659 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 GRM7Q14831 915 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 C16orf72Q14CZ0 275 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 ATP6AP1LQ52LC2 224 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 WASHC2DQ5SRD0 308 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 MANEAQ5SRI9 462 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 CDCP2Q5VXM1 449 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 ATG14Q6ZNE5 492 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 RNF165Q6ZSG1 346 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 RAB11FIP2Q7L804 512 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 ALYREFQ86V81 257 aaKnown RBP11.35□□□□□ -0.59
DDB1-223ENST00000543658 BPHLQ86WA6 291 aaPredicted RBP11.35□□□□□ -0.59
DDB1-223ENST00000543658 TMPRSS12Q86WS5 348 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 PPP1R3BQ86XI6 285 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 ZCCHC10Q8TBK6 192 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 NT5CQ8TCD5 201 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 GAL3ST3Q96A11 431 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 LIN37Q96GY3 246 aaPredicted RBP11.35□□□□□ -0.59
DDB1-223ENST00000543658 PPP3R2Q96LZ3 170 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 RILPQ96NA2 401 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 ZNF317Q96PQ6 595 aaPredicted RBP11.35□□□□□ -0.59
DDB1-223ENST00000543658 MS4A8Q9BY19 250 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 REXO4Q9GZR2 422 aaKnown RBP11.35□□□□□ -0.59
DDB1-223ENST00000543658 EPN3Q9H201 632 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 MEAF6Q9HAF1 191 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 VPS29Q9UBQ0 182 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 LOXL2Q9Y4K0 774 aa11.35□□□□□ -0.59
DDB1-223ENST00000543658 LOC105369274A0A096LPK9 316 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 LOC102723532A0A0G2JNH3 316 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ARHGAP10A1A4S6 786 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 SRRM3A6NNA2 597 aaPredicted RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 POLR1CO15160 346 aaPredicted RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 ERI3O43414 337 aaKnown RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 SHOX2O60902 331 aaPredicted RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 RSL1D1O76021 490 aaKnown RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 SPTBP11277 2137 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 MAPK1P28482 360 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 PLA2G5P39877 138 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 PDX1P52945 283 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ARFIP2P53365 341 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 MAPK10P53779 464 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ARSFP54793 590 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 RAB15P59190 212 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 HMGCS1Q01581 520 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ACSM2AQ08AH3 577 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 MAD2L1Q13257 205 aaPredicted RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 CUL3Q13618 768 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 FAM214AQ32MH5 1076 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 GALNTL6Q49A17 601 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 TMEM35AQ53FP2 167 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 SPIN4Q56A73 249 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 KHDRBS2Q5VWX1 349 aaKnown RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 ACSM2BQ68CK6 577 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ADNP2Q6IQ32 1131 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 NIPAL1Q6NVV3 410 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 FOXR1Q6PIV2 292 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 PAGE2Q7Z2X7 111 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 VN1R4Q7Z5H5 301 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 TMEM126BQ8IUX1 230 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 OR4N4Q8N0Y3 316 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 RNF175Q8N4F7 328 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 RGMAQ96B86 450 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 NDC1Q9BTX1 674 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ACPTQ9BZG2 426 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 ROGDIQ9GZN7 287 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 OR51B5Q9H339 312 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 LRTM1Q9HBL6 345 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 SLC39A1Q9NY26 324 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 KLHL14Q9P2G3 628 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 SRPK3Q9UPE1 567 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 RUVBL1Q9Y265 456 aaKnown RBP11.34□□□□□ -0.59
DDB1-223ENST00000543658 PTGDR2Q9Y5Y4 395 aa11.34□□□□□ -0.59
DDB1-223ENST00000543658 GOLGA8QA0A0J9YX86 632 aa11.33□□□□□ -0.6
DDB1-223ENST00000543658 ATP6AP2A0A1C7CYW4 349 aa11.33□□□□□ -0.6
DDB1-223ENST00000543658 GOLGA8OA6NCC3 632 aa11.33□□□□□ -0.6
DDB1-223ENST00000543658 GOLGA8NF8WBI6 632 aa11.33□□□□□ -0.6
DDB1-223ENST00000543658 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
DDB1-223ENST00000543658 P2RX6O15547 441 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms