RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 KANK2Q63ZY3 851 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 CEACAM20Q6UY09 585 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 FUZQ9BT04 418 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 CCDC32Q9BV29 185 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 NAA50Q9GZZ1 169 aaKnown RBP18.75■□□□□ 0.59
SUDS3-204ENST00000543473 MAGIXQ9H6Y5 334 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 PCDHGB6Q9Y5F9 930 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 FKBP7Q9Y680 259 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 ITGB4P16144 1822 aa18.75■□□□□ 0.59
SUDS3-204ENST00000543473 A0A0G2JPF8 293 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 HNRNPCL3B7ZW38 293 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 HNRNPCL4P0DMR1 293 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 AGXTP21549 392 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 GADD45AP24522 165 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 ARSDP51689 593 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 ARFIP1P53367 373 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 CDH11P55287 796 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 CDK5R2Q13319 367 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 OR4D1Q15615 310 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 GALNT6Q8NCL4 622 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 OR52B6Q8NGF0 335 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 NCSTNQ92542 709 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 AKAP1Q92667 903 aaKnown RBP eCLIP18.74■□□□□ 0.59
SUDS3-204ENST00000543473 PEX13Q92968 403 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 MSANTD3Q96H12 275 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 MGME1Q9BQP7 344 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 OSER1Q9NX31 292 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 CKLFQ9UBR5 152 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 COL18A1P39060 1754 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 UPK1BO75841 260 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 KHKP50053 298 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 B3GNT9Q6UX72 402 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 BRINP2Q9C0B6 783 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 MYH1P12882 1939 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 TRAV6A0A075B6T7 132 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 OR1I1O60431 355 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 BEST1O76090 585 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 LCKP06239 509 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 ERP29P30040 261 aaKnown RBP18.74■□□□□ 0.59
SUDS3-204ENST00000543473 DCTP40126 519 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 PHC3Q8NDX5 983 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 CEP76Q8TAP6 659 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 IGSF5Q9NSI5 407 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 FBXW2Q9UKT8 454 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 A0A0X1KG70 313 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 AVPR1BP47901 424 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 TRIB2Q92519 343 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 TCF7L1Q9HCS4 588 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 TMEM248Q9NWD8 314 aa18.74■□□□□ 0.59
SUDS3-204ENST00000543473 GTPBP1O00178 669 aaKnown RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 ABRAXAS2Q15018 415 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 LRRC73Q5JTD7 316 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 AGMOQ6ZNB7 445 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 TIGD4Q8IY51 512 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 CNDP2Q96KP4 475 aaKnown RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 TTLL2Q9BWV7 592 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 NDOR1Q9UHB4 597 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 NUP50Q9UKX7 468 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 MAB21L2Q9Y586 359 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 MAFKO60675 156 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 PRAMEF12O95522 483 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 CH25HO95992 272 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 IL4RP24394 825 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 DGKGP49619 791 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 UBE2UQ5VVX9 321 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 IQCHQ86VS3 1027 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 C7orf61Q8IZ16 206 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 CADM2Q8N3J6 435 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 Q8N402 240 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 RERGQ96A58 199 aaPredicted RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 TSSK6Q9BXA6 273 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SLC6A15Q9H2J7 730 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 GSTO2Q9H4Y5 243 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 UPB1Q9UBR1 384 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 FAM47E-STBD1D6RA91 191 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 PRAMEF11O60813 436 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 FDXRP22570 491 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SPHARQ15513 63 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 DESI1Q6ICB0 168 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 CYP4V2Q6ZWL3 525 aaPredicted RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 LINC00471Q8N535 108 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 ARL14EPQ8N8R7 260 aaPredicted RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 TSEN15Q8WW01 171 aaKnown RBP18.73■□□□□ 0.59
SUDS3-204ENST00000543473 P2RX2Q9UBL9 471 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 PCDHGA8Q9Y5G5 932 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 MTX2O75431 263 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SLC10A3P09131 477 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SMCO1Q147U7 214 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 NOXRED1Q6NXP6 359 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 ADGRG2Q8IZP9 1017 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SUSD3Q96L08 255 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 IL12RB2Q99665 862 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 DOHHQ9BU89 302 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 BEX1Q9HBH7 125 aa18.73■□□□□ 0.59
SUDS3-204ENST00000543473 SLC38A8A6NNN8 435 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 KLK1P06870 262 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms