RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 PRR35P0CG20 571 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 EPHA3P29320 983 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 GABRA4P48169 554 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ARL4DP49703 201 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ARFIP2P53365 341 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ZFP36L1Q07352 338 aaKnown RBP15.31■□□□□ 0.04
TRIM65-204ENST00000543309 CYP4F3Q08477 520 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 DDX39BQ13838 428 aaKnown RBP15.31■□□□□ 0.04
TRIM65-204ENST00000543309 IMPG1Q17R60 797 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ADPRMQ3LIE5 342 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 SLC9B1Q4ZJI4 515 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 TMEM35AQ53FP2 167 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 TMTC4Q5T4D3 741 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 VWA5B1Q5TIE3 1220 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ADNP2Q6IQ32 1131 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 OGFOD2Q6N063 350 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 Q6ZSR9 355 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 CHSY3Q70JA7 882 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 LARP4Q71RC2 724 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRIM65-204ENST00000543309 VN1R4Q7Z5H5 301 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ASPGQ86U10 573 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 CAMKVQ8NCB2 501 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 OR2T11Q8NH01 316 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 CEP70Q8NHQ1 597 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 THOC1Q96FV9 657 aaKnown RBP15.31■□□□□ 0.04
TRIM65-204ENST00000543309 CCDC74BQ96LY2 380 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 ZNF285Q96NJ3 590 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 TMEM74Q96NL1 305 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 EBF4Q9BQW3 602 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 SYNDIG1Q9H7V2 258 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 FAM60AQ9NP50 221 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 PLCL2Q9UPR0 1127 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 PTGDR2Q9Y5Y4 395 aa15.31■□□□□ 0.04
TRIM65-204ENST00000543309 MDC1Q14676 2089 aaKnown RBP15.31■□□□□ 0.04
TRIM65-204ENST00000543309 AKAP13Q12802 2813 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 WDFY3Q8IZQ1 3526 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 A0A0J9YVX5 310 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 CASC3O15234 703 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 NDUFS4O43181 175 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 PRAMEF10O60809 474 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 DKK1O94907 266 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 TBX6O95947 436 aaPredicted RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 ACPPP15309 386 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 PCSK2P16519 638 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 CCKBRP32239 447 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 STXBP1P61764 594 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 RPS13P62277 151 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 IRX1P78414 480 aaPredicted RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 RGS1Q08116 209 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 NR6A1Q15406 480 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 ATP6AP1LQ52LC2 224 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SPIN4Q56A73 249 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 TCTE1Q5JU00 501 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 KHDRBS2Q5VWX1 349 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 METTL21CQ5VZV1 264 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SCIMPQ6UWF3 145 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 RBM44Q6ZP01 1051 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 MCATQ8IVS2 390 aaKnown RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 PARP9Q8IXQ6 854 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SLC13A3Q8WWT9 602 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 TUBGCP3Q96CW5 907 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 HBEGFQ99075 208 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 CENPKQ9BS16 269 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 NLNQ9BYT8 704 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SLC6A16Q9GZN6 736 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 WDR55Q9H6Y2 383 aaPredicted RBP15.3■□□□□ 0.04
TRIM65-204ENST00000543309 AKTIPQ9H8T0 292 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 C1orf109Q9NX04 203 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SIRT5Q9NXA8 310 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 TOR4AQ9NXH8 423 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 SLC12A4Q9UP95 1085 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 ARL2BPQ9Y2Y0 163 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 TMED5Q9Y3A6 229 aa15.3■□□□□ 0.04
TRIM65-204ENST00000543309 LOC105369274A0A096LPK9 316 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 LOC102723532A0A0G2JNH3 316 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 ATP6AP2A0A1C7CYW4 349 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 LRIT2A6NDA9 550 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 URADA6NGE7 173 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 H0YGG7 62 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 TMX2-CTNND1H3BSU7 103 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 ATP6AP2O75787 350 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 LBPP18428 481 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 TSFMP43897 325 aaKnown RBP15.29■□□□□ 0.04
TRIM65-204ENST00000543309 EMP3P54852 163 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 ARF3P61204 181 aaPredicted RBP15.29■□□□□ 0.04
TRIM65-204ENST00000543309 CYP4F2P78329 520 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 HYAL2Q12891 473 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 MAD2L1Q13257 205 aaPredicted RBP15.29■□□□□ 0.04
TRIM65-204ENST00000543309 TUBB3Q13509 450 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 LSM12Q3MHD2 195 aaKnown RBP15.29■□□□□ 0.04
TRIM65-204ENST00000543309 C6orf136Q5SQH8 315 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 SNAP47Q5SQN1 464 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 DEPDC1Q5TB30 811 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 CDCP2Q5VXM1 449 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 FRMPD2BQ6IN97 320 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 CYB5D1Q6P9G0 228 aa15.29■□□□□ 0.04
TRIM65-204ENST00000543309 UNQ6494/PRO21346Q6UXR6 183 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms