RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CLEC3BP05452 202 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SLC2A4P14672 509 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 RPS2P15880 293 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 FUT4P22083 530 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 IDSP22304 550 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 RPS3P23396 243 aaKnown RBP eCLIP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 MAPK3P27361 379 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SSTR1P30872 391 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SLC1A2P43004 574 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 PRLHRP49683 370 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 DUSP3P51452 185 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CLCNKAP51800 687 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 MGAT5Q09328 741 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CTBP1Q13363 440 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 DCTN2Q13561 401 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 FRG1Q14331 258 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TRIP6Q15654 476 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 GPR19Q15760 415 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TYSND1Q2T9J0 566 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 IKBIPQ70UQ0 350 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 PPP1R3BQ86XI6 285 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 DENND6AQ8IWF6 608 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 IQCF2Q8IXL9 164 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CFAP206Q8IYR0 622 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 UNC5BQ8IZJ1 945 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 DEFB124Q8NES8 71 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 OR2L2Q8NH16 312 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CDKL2Q92772 493 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 LINC00615Q96LM1 132 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 APOLD1Q96LR9 279 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CAMK1GQ96NX5 476 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 PANX3Q96QZ0 392 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SLC12A9Q9BXP2 914 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TWSG1Q9GZX9 223 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 RABEP2Q9H5N1 569 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 FBXO6Q9NRD1 293 aaPredicted RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SNX15Q9NRS6 342 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SPATS2LQ9NUQ6 558 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TBC1D23Q9NUY8 699 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 INTS10Q9NVR2 710 aaKnown RBP4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SLC23A2Q9UGH3 650 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 FBXO5Q9UKT4 447 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CEP295Q9C0D2 2601 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 CACNA1EQ15878 2313 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 SCN8AQ9UQD0 1980 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 MYLKQ15746 1914 aa4.95□□□□□ -1.62
CLIP1-217ENST00000543205 TRBV23OR9-2A0A075B6M9 112 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CLCA1A8K7I4 914 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 PDZK1P1A8MUH7 402 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 FAM25EA8MYX2 175 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 E5RI56 91 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 H3BMM5 538 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 K7EPI3 171 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 PROM1O43490 865 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 TNFSF14O43557 240 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 SGTAO43765 313 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CBFA2T3O75081 653 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 SPAG6O75602 509 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 KRT38O76015 456 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 HAUS5O94927 633 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 GIMD1P0DJR0 217 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CKMT2P17540 419 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ITGB6P18564 788 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CHRM3P20309 590 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CSRP1P21291 193 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ECHS1P30084 290 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 GCH1P30793 250 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 STX2P32856 288 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 PHBP35232 272 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 LEPRP48357 1165 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 NOVA1P51513 510 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ZNF41P51814 821 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ADARP55265 1226 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 SH3BGRP55822 239 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 DMPKQ09013 629 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 TMED2Q15363 201 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ZKSCAN8Q15776 578 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 SYTL3Q4VX76 610 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 TEDDM1Q5T9Z0 273 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 TRMT10BQ6PF06 316 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 KIAA0408Q6ZU52 694 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ESPNLQ6ZVH7 1005 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 PIP4P1Q86T03 277 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 CNTN4Q8IWV2 1026 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 EIF1ADQ8N9N8 165 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 KYQ8NBH2 561 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 HM13Q8TCT9 377 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 MAPK15Q8TD08 544 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ELMO1Q92556 727 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 LPGAT1Q92604 370 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 NMD3Q96D46 503 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 P2RY12Q9H244 342 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 MMADHCQ9H3L0 296 aaPredicted RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 STN1Q9H668 368 aaKnown RBP4.94□□□□□ -1.62
CLIP1-217ENST00000543205 PLAC1Q9HBJ0 212 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 AP5S1Q9NUS5 200 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 MOCS1Q9NZB8 636 aa4.94□□□□□ -1.62
CLIP1-217ENST00000543205 TXNDC16Q9P2K2 825 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms