RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 SVOPLQ8N434 492 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 C16orf78Q8WTQ4 265 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 TPD52L3Q96J77 140 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 BARD1Q99728 777 aaKnown RBP15.67■□□□□ 0.1
COL4A1-204ENST00000543140 CUEDC1Q9NWM3 386 aaPredicted RBP15.67■□□□□ 0.1
COL4A1-204ENST00000543140 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 CKAP5Q14008 2032 aa15.67■□□□□ 0.1
COL4A1-204ENST00000543140 EYSQ5T1H1 3165 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 MYO1GB0I1T2 1018 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 SCAMP1O15126 338 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 BMP10O95393 424 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 ACP5P13686 325 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 CDH2P19022 906 aaPredicted RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 MAGEA10P43363 369 aaPredicted RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 GALK1P51570 392 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 RPA4Q13156 261 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 CAMKMTQ7Z624 323 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 NAGSQ8N159 534 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 OR5K1Q8NHB7 308 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 OR5K2Q8NHB8 316 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 SETD7Q8WTS6 366 aaKnown RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 MPP4Q96JB8 637 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 MBOAT4Q96T53 435 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 RBM4BQ9BQ04 359 aaKnown RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 RBM4Q9BWF3 364 aaKnown RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 AMBRA1Q9C0C7 1298 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 ING2Q9H160 280 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 WDR26Q9H7D7 661 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 FAM118AQ9NWS6 357 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 ZFR2Q9UPR6 939 aaKnown RBP15.66■□□□□ 0.1
COL4A1-204ENST00000543140 WDR37Q9Y2I8 494 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 HEATR5BQ9P2D3 2071 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 C6orf47O95873 294 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 HYAL1Q12794 435 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 RGNQ15493 299 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 ZFP90Q8TF47 636 aa15.66■□□□□ 0.1
COL4A1-204ENST00000543140 FEZF1A0PJY2 475 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 HPRP00739 348 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 FURINP09958 794 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 SLC35G4P0C7Q5 338 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 LAMP2P13473 410 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 IL1RNP18510 177 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 POLR2IP36954 125 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 CRATP43155 626 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 VLDLRP98155 873 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ROR2Q01974 943 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PRSS53Q2L4Q9 553 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 COX20Q5RI15 118 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ANKRD54Q6NXT1 300 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ERICH5Q6P6B1 374 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 LCTLQ6UWM7 567 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 B3GNT6Q6ZMB0 384 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 C17orf64Q86WR6 236 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 METTL4Q8N3J2 472 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 SYNPOQ8N3V7 929 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PPCDCQ96CD2 204 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 HSH2DQ96JZ2 352 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 MYOCQ99972 504 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 TRMT61BQ9BVS5 477 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 MKRN2Q9H000 416 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 IL1RAPQ9NPH3 570 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ATP6V1HQ9UI12 483 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 RTCAO00442 366 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 RNASET2O00584 256 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 C5AR1P21730 350 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PCSK6P29122 969 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 EIF2DP41214 584 aaKnown RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PIK3CBP42338 1070 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 KCNAB2Q13303 367 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 LSAMPQ13449 338 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 CYP2A13Q16696 494 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 MPEG1Q2M385 716 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ATAT1Q5SQI0 421 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 CCNYL2Q5T2Q4 361 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 BORAQ6PGQ7 559 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 NUDT18Q6ZVK8 323 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 CEP68Q76N32 757 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 GALNT5Q7Z7M9 940 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 FAM129CQ86XR2 697 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 OR5AK3PQ8NH89 298 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 EZH1Q92800 747 aaPredicted RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 TMEM121BQ9BXQ6 578 aaPredicted RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 TEX101Q9BY14 249 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 IFT80Q9P2H3 777 aaPredicted RBP15.65■□□□□ 0.1
COL4A1-204ENST00000543140 MOSPD1Q9UJG1 213 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 RPS6KA6Q9UK32 745 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 ACSL6Q9UKU0 697 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 PLEKHM1Q9Y4G2 1056 aa15.65■□□□□ 0.1
COL4A1-204ENST00000543140 MYO10Q9HD67 2058 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 H7BY64 318 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 KMOO15229 486 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 MITFO75030 526 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 IL3P08700 152 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 EEF1B2P24534 225 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 MAT2AP31153 395 aaKnown RBP15.64■□□□□ 0.09
COL4A1-204ENST00000543140 MAGEA2P43356 314 aa15.64■□□□□ 0.09
COL4A1-204ENST00000543140 TPD52P55327 224 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms