RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 PHRF1Q9P1Y6 1649 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NID2Q14112 1375 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PCDH11YQ9BZA8 1340 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 A0A0B4J203 849 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 H7C0C1 242 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PSMD11O00231 422 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PSMD12O00232 456 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 YKT6O15498 198 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SULT1B1O43704 296 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NDUFS7O75251 213 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PTP4A3O75365 173 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NKX2-2O95096 273 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GH1P01241 217 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 FGGP02679 453 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NGFRP08138 427 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ABHD2P08910 425 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 HOXB7P09629 217 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 HSPD1P10809 573 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GLULP15104 373 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ITGB8P26012 769 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PON1P27169 355 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 MAPK4P31152 587 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GNL1P36915 607 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 EIF2S3P41091 472 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 KLK7P49862 253 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 AP2S1P53680 142 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ARF3P61204 181 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 YWHAGP61981 247 aaKnown RBP eCLIP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ARF1P84077 181 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 LTBQ06643 244 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SELENBP1Q13228 472 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PRKG2Q13237 762 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 STX3Q13277 289 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SELPLGQ14242 412 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GNA13Q14344 377 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 TOMM20Q15388 145 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 OASLQ15646 514 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 HLFQ16534 295 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SMU1Q2TAY7 513 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 AMZ1Q400G9 498 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SOWAHCQ53LP3 525 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 TCHHL1Q5QJ38 904 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ATAD3BQ5T9A4 648 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GGNBP1Q5YKI7 109 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 LPCAT4Q643R3 524 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ITPRIPL1Q6GPH6 555 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NEK5Q6P3R8 708 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 FIP1L1Q6UN15 594 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 OTOAQ7RTW8 1153 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PRUNE1Q86TP1 453 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 AKAP14Q86UN6 197 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 TICAM1Q8IUC6 712 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 FOXRED2Q8IWF2 684 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NDUFAF2Q8N183 169 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SPATA6LQ8N4H0 392 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 C9orf106Q8NAJ2 232 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 RBM15BQ8NDT2 890 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 OR10Z1Q8NGY1 313 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 FBXO25Q8TCJ0 367 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 ISOC1Q96CN7 298 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 DCUN1D1Q96GG9 259 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 CNDP2Q96KP4 475 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 MARK4Q96L34 752 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 MTMR9Q96QG7 549 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 DOK1Q99704 481 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GON7Q9BXV9 100 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 DNAI2Q9GZS0 605 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 CDC42EP4Q9H3Q1 356 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 RNF41Q9H4P4 317 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PDZD7Q9H5P4 517 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SYTL2Q9HCH5 934 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 MMP25Q9NPA2 562 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 LTB4R2Q9NPC1 389 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 FAM207AQ9NSI2 230 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 HCFC1R1Q9NWW0 138 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GDAP2Q9NXN4 497 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PCYOX1Q9UHG3 505 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 SLC7A8Q9UHI5 535 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PTBP2Q9UKA9 531 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 POU2F3Q9UKI9 436 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 NUP50Q9UKX7 468 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 GRID1Q9ULK0 1009 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PACSIN2Q9UNF0 486 aaPredicted RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PSMD13Q9UNM6 376 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 PLA2G4CQ9UP65 541 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 WBP11Q9Y2W2 641 aaKnown RBP4.33□□□□□ -1.72
C2CD3-218ENST00000542484 CPQQ9Y646 472 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 AP4B1Q9Y6B7 739 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 CACNA1IQ9P0X4 2223 aa4.33□□□□□ -1.72
C2CD3-218ENST00000542484 EDC4Q6P2E9 1401 aaKnown RBP4.32□□□□□ -1.72
C2CD3-218ENST00000542484 FLT1P17948 1338 aa4.32□□□□□ -1.72
C2CD3-218ENST00000542484 A0A087WXM4 84 aa4.32□□□□□ -1.72
C2CD3-218ENST00000542484 MAGEB16A2A368 324 aa4.32□□□□□ -1.72
C2CD3-218ENST00000542484 TRIM49BA6NDI0 452 aa4.32□□□□□ -1.72
C2CD3-218ENST00000542484 OR5K3A6NET4 321 aa4.32□□□□□ -1.72
C2CD3-218ENST00000542484 TRIM64BA6NI03 449 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms