RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 NSMCE3Q96MG7 304 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ALS2CR12Q96Q35 445 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 FCRL5Q96RD9 977 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 GSDMCQ9BYG8 508 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 GPR63Q9BZJ6 419 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ABCG8Q9H221 673 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 GOLPH3Q9H4A6 298 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 TRABDQ9H4I3 376 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 MAGEE1Q9HCI5 957 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 PSD3Q9NYI0 1048 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 HACD3Q9P035 362 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 RSPH14Q9UHP6 348 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 KCND3Q9UK17 655 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 SLC13A4Q9UKG4 626 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 KLK13Q9UKR3 277 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 VPS4AQ9UN37 437 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 AAR2Q9Y312 384 aaKnown RBP5.27□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF292O60281 2723 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DCHS1Q96JQ0 3298 aa5.27□□□□□ -1.57
CPSF7-220ENST00000541963 DMXL1Q9Y485 3027 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CCDC187A0A096LP49 1063 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LOC285095A0A1B0GVY8 99 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GXYLT2A0PJZ3 443 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CPED1A4D0V7 1026 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GRID2IPA4D2P6 1211 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM202A6NGA9 273 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TMX2-CTNND1H3BSU7 103 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 NKX2-8O15522 239 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 PSMD3O43242 534 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 HNRNPRO43390 633 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SUV39H1O43463 412 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GCATO75600 419 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TOP3BO95985 862 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 AGR2O95994 175 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MT-CYBP00156 380 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MT-CO3P00414 261 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MMP2P08253 660 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CCDC175P0C221 793 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GIMD1P0DJR0 217 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 HLA-DPA1P20036 260 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LHCGRP22888 699 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CNTFP26441 200 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 DUSP1P28562 367 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CXCR5P32302 372 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ACTN2P35609 894 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SPINT3P49223 89 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 STC1P52823 247 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GEMP55040 296 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CDK3Q00526 305 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 OTUD4Q01804 1114 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ILF3Q12906 894 aaKnown RBP eCLIP5.26□□□□□ -1.572e-6■■■■□ 21.5
CPSF7-220ENST00000541963 GALNT3Q14435 633 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 RPS6KA1Q15418 735 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CDKN3Q16667 212 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ALG11Q2TAA5 492 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SEL1L2Q5TEA6 688 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 PDPK2PQ6A1A2 396 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 NAPRTQ6XQN6 538 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 EFL1Q7Z2Z2 1120 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 KDELC2Q7Z4H8 507 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TSPAN33Q86UF1 283 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LRRTM4Q86VH4 590 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 HEATR4Q86WZ0 1026 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM139Q8IV31 216 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LRRC8AQ8IWT6 810 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 RBFAQ8N0V3 343 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF567Q8N184 647 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ARL10Q8N8L6 244 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LRRC57Q8N9N7 239 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 BEND2Q8NDZ0 799 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SRFBP1Q8NEF9 429 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ACTL9Q8TC94 416 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MAPK15Q8TD08 544 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 DAZAP1Q96EP5 407 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 QKIQ96PU8 341 aaKnown RBP eCLIP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MYCBPQ99417 103 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 DESI2Q9BSY9 194 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 MECRQ9BV79 373 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LRRC61Q9BV99 259 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 RIOK2Q9BVS4 552 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 FRMD8P1Q9BZ68 369 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TWSG1Q9GZX9 223 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TOR3AQ9H497 397 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 DPEP2Q9H4A9 486 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 RMI1Q9H9A7 625 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SAP30LQ9HAJ7 183 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 G6PC2Q9NQR9 355 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 TRNAU1APQ9NX07 287 aaKnown RBP5.26□□□□□ -1.57
CPSF7-220ENST00000541963 PDP2Q9P2J9 529 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF69Q9UC07 566 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 CD84Q9UIB8 345 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GUCA1BQ9UMX6 200 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 SLC12A4Q9UP95 1085 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 GPR34Q9UPC5 381 aa5.26□□□□□ -1.57
CPSF7-220ENST00000541963 LAMA1P25391 3075 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 LRRK1Q38SD2 2015 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 TRABD2BA6NFA1 517 aa5.25□□□□□ -1.57
CPSF7-220ENST00000541963 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms