RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 OR2T11Q8NH01 316 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 CREB3L4Q8TEY5 395 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ZNF473Q8WTR7 871 aaKnown RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 CCT6BQ92526 530 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 USP7Q93009 1102 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 TM4SF19Q96DZ7 209 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 TCTN2Q96GX1 697 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 MAGEB10Q96LZ2 347 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 UCN2Q96RP3 112 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 DPYSL5Q9BPU6 564 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ZFYVE21Q9BQ24 234 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 SARGQ9BW04 601 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 PITHD1Q9GZP4 211 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 EPN3Q9H201 632 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 KLHL31Q9H511 634 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ELOVL6Q9H5J4 265 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 WDR55Q9H6Y2 383 aaPredicted RBP8.92□□□□□ -0.98
DDX55-208ENST00000541259 KCNK13Q9HB14 408 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 PDE7BQ9NP56 450 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 STARD5Q9NSY2 213 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 ZFP69BQ9UJL9 534 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 DCTN4Q9UJW0 460 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 PCDHGA11Q9Y5H2 935 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 PCDHGA1Q9Y5H4 931 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 AP1M2Q9Y6Q5 423 aa8.92□□□□□ -0.98
DDX55-208ENST00000541259 GOLGA8QA0A0J9YX86 632 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ATP6AP2A0A1C7CYW4 349 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 GOLGA8OA6NCC3 632 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ANKDD1BA6NHY2 528 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 GOLGA8NF8WBI6 632 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 SAP18O00422 153 aaKnown RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 SDHDO14521 159 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 HGSO14964 777 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 HDAC3O15379 428 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 TOX3O15405 576 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 HYAL3O43820 417 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 ATP6AP2O75787 350 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 TGDSO95455 350 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 CHEK2O96017 543 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 EIF2S1P05198 315 aaKnown RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 ANKRD34CP0C6C1 535 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ALOX15P16050 662 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 HNRNPH1P31943 449 aaKnown RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 AHRP35869 848 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ARL4DP49703 201 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 AQP5P55064 265 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 INHBCP55103 352 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 SIM1P81133 766 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 RELAQ04206 551 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 NAA25Q14CX7 972 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 HKDC1Q2TB90 917 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 XKR7Q5GH72 579 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 EPGNQ6UW88 154 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 RBM44Q6ZP01 1051 aaKnown RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 CPLX4Q7Z7G2 160 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 KMT5CQ86Y97 462 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 CARFQ8N187 725 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 KCT2Q8NC54 265 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 WDR48Q8TAF3 677 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 SLC13A3Q8WWT9 602 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 UBE2E3Q969T4 207 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 REPS1Q96D71 796 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 F2RL3Q96RI0 385 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ELAC2Q9BQ52 826 aaKnown RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 EBF4Q9BQW3 602 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 ACPTQ9BZG2 426 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 CHRNA10Q9GZZ6 450 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 SPRTNQ9H040 489 aaPredicted RBP8.91□□□□□ -0.98
DDX55-208ENST00000541259 OR51B5Q9H339 312 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 MEAF6Q9HAF1 191 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 DMRT3Q9NQL9 472 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 OCIAD1Q9NX40 245 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 VTI1BQ9UEU0 232 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 TSC22D4Q9Y3Q8 395 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 CCL27Q9Y4X3 112 aa8.91□□□□□ -0.98
DDX55-208ENST00000541259 A0A0G2JN53 185 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 A0A0G2JND7 137 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 SERTM1A2A2V5 107 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 TMEM150CB9EJG8 249 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 C4orf51C9J302 202 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 SLCO1B7G3V0H7 640 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 H3BMH7 237 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 SLC28A1O00337 649 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 FOXE1O00358 373 aaPredicted RBP8.9□□□□□ -0.98
DDX55-208ENST00000541259 NDUFS4O43181 175 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 CSO75390 466 aaKnown RBP8.9□□□□□ -0.98
DDX55-208ENST00000541259 CLEC3AO75596 197 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 KCNK5O95279 499 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 MED26O95402 600 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 B3GALT4O96024 378 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 MT-CO3P00414 261 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 CCL4P13236 92 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 CEACAM1P13688 526 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 EPHA3P29320 983 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 PIK3CBP42338 1070 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 IDH3AP50213 366 aa8.9□□□□□ -0.98
DDX55-208ENST00000541259 NOVA1P51513 510 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms