RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PCNAP12004 261 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 WT1P19544 449 aaPredicted RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 ALDH3A1P30838 453 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 ARL1P40616 181 aaPredicted RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 HNF4AP41235 474 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 DNAJB13P59910 316 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 RGS1Q08116 209 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 HYAL2Q12891 473 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 DNASE1L3Q13609 305 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 PWP1Q13610 501 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 NDUFA9Q16795 377 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 TOR1AIP1Q5JTV8 583 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 FAM219BQ5XKK7 198 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 TMEM214Q6NUQ4 689 aaKnown RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 FAM198BQ6UWH4 519 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 PRSS41Q7RTY9 318 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 LAS2Q8IYD9 372 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 CCNYL1Q8N7R7 359 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 L3MBTL4Q8NA19 623 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 TRPV3Q8NET8 790 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 TTLQ8NG68 377 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 OR4F6Q8NGB9 312 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 CCT6BQ92526 530 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 MECRQ9BV79 373 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 AICDAQ9GZX7 198 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 STMN4Q9H169 189 aaPredicted RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 RHBGQ9H310 441 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 GSTO2Q9H4Y5 243 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 KLHL31Q9H511 634 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 GPN2Q9H9Y4 310 aaPredicted RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 SLC22A11Q9NSA0 550 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 MRPS18BQ9Y676 258 aaKnown RBP12.09□□□□□ -0.47
TSPAN9-207ENST00000539631 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 A0A0A6YYC8 382 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 I3L1I5 382 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 EFSO43281 561 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 CLEC3AO75596 197 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 OR4F21O95013 312 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 TBX6O95947 436 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 B3GALT4O96024 378 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 SERPINA6P08185 405 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ZNF888P0CJ79 500 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 IL1RNP18510 177 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 GSTM2P28161 218 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ETV4P43268 484 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 NAGLUP54802 743 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 MAGOHP61326 146 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 TLE3Q04726 772 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 FAM53BQ14153 422 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ZRSR2Q15696 482 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 CPSF6Q16630 551 aaKnown RBP eCLIP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 NKAIN1Q4KMZ8 207 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 BROXQ5VW32 411 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 MLIPQ5VWP3 458 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 LIPMQ5VYY2 423 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 LETMD1Q6P1Q0 360 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 COX15Q7KZN9 410 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 SYVN1Q86TM6 617 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 RNF175Q8N4F7 328 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 OR7G3Q8NG95 312 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 OR9A4Q8NGU2 314 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 UBE2E3Q969T4 207 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 KIAA1143Q96AT1 154 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ARL8AQ96BM9 186 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 TLCD1Q96CP7 247 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 CCNL2Q96S94 520 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 DPH2Q9BQC3 489 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 DRC3Q9H069 523 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ZNF304Q9HCX3 659 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 PRM3Q9NNZ6 103 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 IFT80Q9P2H3 777 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 GPN3Q9UHW5 284 aaPredicted RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 ZNF225Q9UK10 706 aa12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 TPRP12270 2363 aaKnown RBP12.08□□□□□ -0.48
TSPAN9-207ENST00000539631 C4orf51C9J302 202 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 H0YIV9 168 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 FFAR3O14843 346 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 GPR42O15529 346 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 PRPF4O43172 522 aaKnown RBP eCLIP12.07□□□□□ -0.485e-8■■■■■ 35.7
TSPAN9-207ENST00000539631 TRIM13O60858 407 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 CNOT3O75175 753 aaKnown RBP12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 SASH3O75995 380 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 ONECUT2O95948 504 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 OTCP00480 354 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 RAB40ALP0C0E4 278 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 SMIM10L1P0DMW3 83 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 PIM1P11309 404 aaPredicted RBP12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 CCR10P46092 362 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 RAB8AP61006 207 aa12.07□□□□□ -0.48
TSPAN9-207ENST00000539631 RPS18P62269 152 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms