RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ARHGDIAP52565 204 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 PFN3P60673 137 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC7A9P82251 487 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 MPP7Q5T2T1 576 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 Q6ZVU0 165 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 HIPK1Q86Z02 1210 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 GALNT13Q8IUC8 556 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 ELOVL6Q9H5J4 265 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 KIAA1671Q9BY89 1806 aa12.12□□□□□ -0.47
SFSWAP-208ENST00000539506 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 GFYI3L273 518 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 RFXANKO14593 260 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 ERN1O75460 977 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 WNT3P56703 355 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 BCL7AQ4VC05 210 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 FAM180BQ6P0A1 224 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 ENTHD1Q8IYW4 607 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 L3MBTL4Q8NA19 623 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 AASDHPPTQ9NRN7 309 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 THG1LQ9NWX6 298 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 LSM7Q9UK45 103 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 BTBD3Q9Y2F9 522 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 N6AMT1Q9Y5N5 214 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 PDZK1P1A8MUH7 402 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC16A6O15403 523 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 SCN2BO60939 215 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 FHP07954 510 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 S100A1P23297 94 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 POU1F1P28069 291 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 RYKP34925 604 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 MXD1Q05195 221 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 MED22Q15528 200 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 CCSMST1Q4G0I0 132 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 SNAP47Q5SQN1 464 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 VANGL1Q8TAA9 524 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 APH1BQ8WW43 257 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 HSH2DQ96JZ2 352 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 SH3GL1Q99961 368 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 EHD3Q9NZN3 535 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 OSGIN1Q9UJX0 560 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 OR2A25A4D2G3 310 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 PTHP01270 115 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 S100A5P33763 92 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 TLE2Q04725 743 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 DOC2BQ14184 412 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 DMC1Q14565 340 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 IRF3Q14653 427 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 UGT8Q16880 541 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 NOXRED1Q6NXP6 359 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 USP45Q70EL2 814 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 DDX53Q86TM3 631 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 PHF10Q8WUB8 498 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 TESCQ96BS2 214 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 MMP28Q9H239 520 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
SFSWAP-208ENST00000539506 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 KMOO15229 486 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 ENGP17813 658 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 PRPH2P23942 346 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 ACOX1Q15067 660 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 TRIM60Q495X7 471 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 TMEM215Q68D42 235 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 CYP2U1Q7Z449 544 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 SPPL2AQ8TCT8 520 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 CMTM7Q96FZ5 175 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 PANX1Q96RD7 426 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 NUAK2Q9H093 628 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 ETHE1O95571 254 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 CSF2P04141 144 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 MAGEA2P43356 314 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 NPRL3Q12980 569 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 CHIT1Q13231 466 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 FRG2Q64ET8 278 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 CYP4Z2PQ8N1L4 340 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 LMNTD1Q8N9Z9 388 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 FRG2BQ96QU4 278 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 OR5M11Q96RB7 305 aa12.1□□□□□ -0.47
SFSWAP-208ENST00000539506 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms